Factsheet for PGSC0003DMT400015739

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g047840.2.1	Tomato	extracellular	93.4	93.4
VIT_19s0090g00490.t01	Wine grape	extracellular	61.32	58.56
AT5G15802.1	Thale cress	extracellular	52.83	56.57
GSMUA_Achr8P28110_001	Banana	extracellular	57.55	54.95
OQU78451	Sorghum	extracellular	55.66	54.63
Os03t0414400-01	Rice	endoplasmic reticulum, extracellular	56.6	54.05
EER92129	Sorghum	extracellular	55.66	53.15
Bra008673.1-P	Field mustard	extracellular	50.94	52.94
CDX69498	Canola	extracellular	50.94	52.94
CDY26463	Canola	extracellular	50.94	52.94
KRG93695	Soybean	extracellular	54.72	52.73
TraesCS3A01G076200.1	Wheat	extracellular	50.94	48.65
TraesCS3B01G090100.1	Wheat	extracellular	50.94	48.65
TraesCS3D01G076200.1	Wheat	extracellular	50.0	47.75
HORVU3Hr1G013600.2	Barley	extracellular	49.06	46.85
Zm00001d039070_P001	Maize	plastid	57.55	38.36

Protein Annotations

EnsemblPlants:PGSC0003DMT400015739	EnsemblPlantsGene:PGSC0003DMG400006148	EntrezGene:102593758	PANTHER:PTHR37760	PGSC:PGSC0003DMG400006148	RefSeq:XP_006363014.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000295A861	UniProt:M1A6H2	MapMan:1.1.2.9.4	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400006148]

Coordinates

chr7:-:44388139..44389872

Molecular Weight (calculated)

11104.5 Da

IEP (calculated)

8.786

GRAVY (calculated)

0.111

Length

106 amino acids

Sequence
(BLAST)

001: MFEHITASEI AGFGVGGLLL AATIYAPKID SFISTSQRSS LGMCKKCGDL RLIACSSCKG SGTIKGGAFN FILLEDKSKV GSSSSCTKCR ARGHFQCPEC
101: SKLSQA

Best Arabidopsis Sequence Match ( AT5G15802.1 )
(BLAST)

1: MQSLTSNEVA GLAVGALLLG ATIAAPKVDA FIAASQRRSL GMCRKCGDLK NVACGRCKGT GTIKSGGFFG FSDSSNTRSV ACDNCQAKGC FPCPECSKS

Arabidopsis Description

Chaperone [Source:UniProtKB/TrEMBL;Acc:Q8GYN2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.