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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 4
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046210_P001 Maize endoplasmic reticulum 77.68 72.84
KXG35991 Sorghum endoplasmic reticulum, extracellular, vacuole 65.5 65.74
KXG35989 Sorghum vacuole 60.89 65.61
GSMUA_Achr11P... Banana endoplasmic reticulum, mitochondrion, vacuole 54.61 55.12
KXG21836 Sorghum endoplasmic reticulum, vacuole 48.71 50.29
EES18092 Sorghum endoplasmic reticulum, vacuole 45.39 48.33
OQU87739 Sorghum vacuole 42.8 48.23
EES12493 Sorghum vacuole 39.67 42.24
EES12505 Sorghum vacuole 39.48 41.39
EES12506 Sorghum vacuole 38.75 41.18
EES12501 Sorghum endoplasmic reticulum, extracellular, vacuole 39.11 41.16
KXG26707 Sorghum mitochondrion 38.93 40.5
OQU81959 Sorghum vacuole 38.19 40.35
EES12502 Sorghum endoplasmic reticulum 38.75 40.23
OQU81953 Sorghum endoplasmic reticulum, vacuole 38.93 40.11
KXG26705 Sorghum cytosol, endoplasmic reticulum, vacuole 39.67 39.74
KXG23299 Sorghum plastid 36.53 39.52
OQU81967 Sorghum endoplasmic reticulum 37.64 38.86
EES15867 Sorghum plastid 39.11 37.52
OQU78971 Sorghum plastid 38.38 37.14
EES16911 Sorghum cytosol 19.19 33.55
Protein Annotations
Gene3D:3.20.20.80MapMan:50.3.2EntrezGene:8076731UniProt:C5Z4Q6EnsemblPlants:EER89952ProteinID:EER89952
ProteinID:EER89952.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0008422GO:GO:0016787GO:GO:1901657InterPro:Glyco_hydro_1InterPro:Glyco_hydro_1_N_CS
InterPro:Glycoside_hydrolase_SFPFAM:PF00232PRINTS:PR00131ScanProsite:PS00653PANTHER:PTHR10353PANTHER:PTHR10353:SF78
EnsemblPlantsGene:SORBI_3010G170300SUPFAM:SSF51445unigene:Sbi.8960SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A898A8
RefSeq:XP_002438585.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:-:50166260..50169740
Molecular Weight (calculated)
60344.2 Da
IEP (calculated)
6.434
GRAVY (calculated)
-0.263
Length
542 amino acids
Sequence
(BLAST)
001: MVELTPRGNG CCPRVLSVSL LLLLLAALLP STHVSSAAAA AAITRGDFPE GFVFGAGASA YQVEGAWAED GKKPSIWDTY THSGYSIDHA TGDVAADQYH
101: HYKEDVKLMH DMGLDAYRFS IAWSRLIPDG RGAVNPKGLE YYNSLINELL RYGIQPHVTI YHFDLPQALQ DEYNGLLSPR IIDDFTAYAD VCFRSFGDRV
201: KHWITVNEPN IEPLGGYDQG YLPPRRCSAP FGLAGVPCTH GNSTTEPYVV AHHLLLAHAS AVSLYRRKYQ GEQGGRIGLT LLAYWYEPAT HKPEDVQAAA
301: RANDFTLGWF MHPLVHGDYP PVMRRNAGSR LPVLTAQESA MVRGSFDFVG INQYGALLVE ADLGQLKREL RDYYGDTAVN FITLPFESTV RNQEPQLGLR
401: NKEAPWALNK VLEHLQIQYG NPPVMIHENG AGHEPDPSGA FLYDDEFRAH FLQVYIRAAL GSVKNGSDVR GYFVWSFMDV FEYLFAYRFR FGLYGVDFAA
501: DDRTRYARSS ARWYAGFLRR GGGDLTPPAP PLGHGHGSTY SE
Best Arabidopsis Sequence Match ( AT1G02850.2 )
(BLAST)
001: MKLLSNSLMF LPLLALALTA VSSLKYSRND FPPGFVFGSG TSAYQVEGAA DEDGRTPSIW DVFAHAGHSG VAAGNVACDQ YHKYKEDVKL MADMGLEAYR
101: FSISWSRLLP SGRGPINPKG LQYYNNLIDE LITHGIQPHV TLHHFDLPQA LEDEYGGWLS QEIVRDFTAY ADTCFKEFGD RVSHWTTINE VNVFALGGYD
201: QGITPPARCS PPFGLNCTKG NSSIEPYIAV HNMLLAHASA TILYKQQYKY KQHGSVGISV YTYGAVPLTN SVKDKQATAR VNDFYIGWIL HPLVFGDYPE
301: TMKTNVGSRL PAFTEEESEQ VKGAFDFVGV INYMALYVKD NSSSLKPNLQ DFNTDIAVEM TLVGNTSIEN EYANTPWSLQ QILLYVKETY GNPPVYILEN
401: GQMTPHSSSL VDTTRVKYLS SYIKAVLHSL RKGSDVKGYF QWSLMDVFEL FGGYERSFGL LYVDFKDPSL KRSPKLSAHW YSSFLKGTLH HPSYASS
Arabidopsis Description
BGLU11Beta-glucosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:B3H5Q1]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.