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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 8
  • plasma membrane 5
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d025846_P001 Maize extracellular 82.79 82.47
HORVU2Hr1G089050.3 Barley endoplasmic reticulum, extracellular, vacuole 73.5 74.66
TraesCS2B01G401500.2 Wheat endoplasmic reticulum 73.31 74.61
TraesCS2D01G381000.1 Wheat endoplasmic reticulum, extracellular, vacuole 72.92 74.21
TraesCS2A01G384300.1 Wheat endoplasmic reticulum, extracellular, vacuole 72.53 73.67
TraesCS2A01G384400.1 Wheat vacuole 71.57 72.83
Os04t0513400-01 Rice extracellular, plasma membrane 37.72 72.76
TraesCSU01G242100.2 Wheat cytosol 35.2 72.22
TraesCS2D01G381100.1 Wheat vacuole 70.99 72.1
TraesCS2A01G038400.2 Wheat vacuole 70.6 71.43
TraesCS2B01G051600.1 Wheat unclear 70.99 71.26
TraesCS2D01G037400.2 Wheat vacuole 70.41 70.68
HORVU2Hr1G088980.2 Barley endoplasmic reticulum, vacuole 70.21 69.81
TraesCS2A01G039400.1 Wheat cytosol 36.56 67.5
HORVU1Hr1G010010.4 Barley cytosol, vacuole 27.08 62.78
GSMUA_Achr8P19060_001 Banana endoplasmic reticulum, vacuole 56.48 57.48
EES12506 Sorghum vacuole 54.74 55.49
KXG26707 Sorghum mitochondrion 54.74 54.32
EES12501 Sorghum endoplasmic reticulum, extracellular, vacuole 53.97 54.17
EES12502 Sorghum endoplasmic reticulum 54.55 54.02
OQU81959 Sorghum vacuole 53.0 53.41
EES12493 Sorghum vacuole 52.42 53.24
OQU81967 Sorghum endoplasmic reticulum 53.0 52.19
Os04t0513700-00 Rice cytosol 39.07 51.93
KXG26705 Sorghum cytosol, endoplasmic reticulum, vacuole 53.97 51.57
VIT_10s0116g00780.t01 Wine grape endoplasmic reticulum, vacuole 51.45 51.25
CDY68226 Canola cytosol, vacuole 42.75 50.46
CDX79092 Canola cytosol, nucleus, vacuole 45.65 50.21
OQU81953 Sorghum endoplasmic reticulum, vacuole 51.06 50.19
PGSC0003DMT400013037 Potato mitochondrion 40.04 49.76
Bra013557.1-P Field mustard vacuole 48.74 48.84
Bra038756.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 48.74 48.46
CDX94055 Canola endoplasmic reticulum, extracellular, vacuole 48.55 48.36
CDX98704 Canola endoplasmic reticulum, extracellular, vacuole 47.2 48.32
Solyc03g031730.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 48.16 48.16
Solyc02g080300.2.1 Tomato vacuole 47.97 48.06
Solyc02g080290.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 48.16 47.88
Solyc02g080310.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 48.16 47.88
KRH51056 Soybean endoplasmic reticulum 47.58 46.95
Bra038755.1-P Field mustard endoplasmic reticulum, vacuole 47.2 46.83
KRH11401 Soybean mitochondrion 49.71 46.81
AT4G21760.2 Thale cress cytosol, vacuole 49.13 46.61
Bra031392.1-P Field mustard endoplasmic reticulum, vacuole 46.23 46.23
CDY25325 Canola endoplasmic reticulum, vacuole 42.55 45.93
CDY55219 Canola endoplasmic reticulum, vacuole 45.84 45.84
Bra028383.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 45.65 45.74
CDY47163 Canola endoplasmic reticulum, vacuole 45.65 45.74
CDX98706 Canola cytosol 26.11 45.61
AT1G61820.1 Thale cress endoplasmic reticulum, extracellular, vacuole 45.45 45.54
CDX94056 Canola vacuole 45.65 44.61
AT1G61810.3 Thale cress endoplasmic reticulum, vacuole 44.49 42.36
CDY07263 Canola endoplasmic reticulum, vacuole 41.01 41.81
KXG35989 Sorghum vacuole 40.43 41.55
KXG35991 Sorghum endoplasmic reticulum, extracellular, vacuole 41.59 39.81
EER89952 Sorghum endoplasmic reticulum, vacuole 41.39 39.48
KXG21836 Sorghum endoplasmic reticulum, vacuole 39.65 39.05
OQU87739 Sorghum vacuole 35.78 38.46
EES18092 Sorghum endoplasmic reticulum, vacuole 36.56 37.13
KXG23299 Sorghum plastid 35.4 36.53
EES15867 Sorghum plastid 39.07 35.75
OQU78971 Sorghum plastid 37.72 34.82
CDY25326 Canola endoplasmic reticulum, extracellular, vacuole 44.87 33.57
EES16911 Sorghum cytosol 19.34 32.26
KRH51055 Soybean plastid 47.0 27.58
Protein Annotations
MapMan:21.6.3.2Gene3D:3.20.20.80EntrezGene:8064486UniProt:C5YC21EnsemblPlants:EES12505ProteinID:EES12505
ProteinID:EES12505.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0008422GO:GO:0016787GO:GO:0016798GO:GO:1901657InterPro:Glyco_hydro_1
InterPro:Glyco_hydro_1_ASInterPro:Glyco_hydro_1_N_CSInterPro:Glycoside_hydrolase_SFPFAM:PF00232PRINTS:PR00131ScanProsite:PS00572
ScanProsite:PS00653PANTHER:PTHR10353PANTHER:PTHR10353:SF40EnsemblPlantsGene:SORBI_3006G146000SUPFAM:SSF51445unigene:Sbi.6267
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A877A1RefSeq:XP_002448177.1SEG:seg:
Description
hypothetical protein
Coordinates
chr6:-:50796167..50801805
Molecular Weight (calculated)
57933.2 Da
IEP (calculated)
6.156
GRAVY (calculated)
-0.243
Length
517 amino acids
Sequence
(BLAST)
001: MATARAIAAA AAVLVAALLA PAARGVDRGE FPPGFLFGAA TSAYQIEGAY LEDGKGLCNW DVFTHTHTGA IMDGRTGDVA DDHYHRYMGD VEILQSLGVN
101: AYRFSISWAR ILPRGRLGGV NAGGIAFYNR LIDALLQKGI QPFVTLNHFD MPHELDVRYV GWLGAGIRDE FEYYADVCFA AFGDRVRFWT TFNEPNLSTK
201: FQYMLGVYPP RHCSPPFGSC NSGNSHREPY VAAHNIIMSH AAAVRNYKES YQAKQGGSIG IVTAMKWYEP LTNTTEDILA ARRAQSFETE WFLDPIFFGD
301: YPRAMREILQ SNLPTFTAEE KKLLLQYKPD FIGLNHYTAI YAKDCIHSPC NLQTYEGNAF VLATGEKDGV KIGRDTALSG FYDVPEAIEP AIMFVNGRYK
401: DTPVYITENG FSQWSDANRE GLINDVARKN YLQGYVTCLS KAVRNGANVR GYFVWTLLDN FEWTFGYTVR FGLYHVDYDT QERTPRMSAT WYQGFLTAGN
501: TSLVTHEDEA QARRADA
Best Arabidopsis Sequence Match ( AT1G61810.1 )
(BLAST)
001: MKNLTSFVIV ILLQSLLFHV YGRHQSSSKN ILVDSSPFPS DFLFGTASSA YQYEGAFLTD GKSLNNWDVF THKNPGKILD KNNADRAVDQ YNRFLEDIQL
101: MSFLGVNSYR FSISWCRILP RGRFGEINYL GIKYYNIFID ALISRGIKPF VTLNHVDYPQ ELEDRFQSWL NPEMQKEFGY LADICFKHFG NRVKYWTTLN
201: EPNQQLILGY LTGKFPPSRC SSPYGNCSQG NSETEPFIAA HNMILAHAKA VNIYKTKYQK EQKGSIGIVV QTSWFEPISD SNADKEAAER AQSFYSNWIL
301: DPVIYGKYPK EMVDILGPAL PQFSSNEVKN LEKSRADFVG INHYTSYFIQ DCLTSACNTG HGAFKAEGYA LKLDRKGNVT IGELTDVNWQ HIDPTGFHKM
401: LNYLKDRYPN MPMFITENGF GDLQKPETTD KELLNDTKRI QYMSGYLEAL QAAMRDGANV KGYFVWSLLD NFEWLFGYKV RFGLFHVDLT TLKRSPKQSA
501: SWYKNYIEEH VNRRDIVDNY
Arabidopsis Description
BGLU45Beta-glucosidase 45 [Source:UniProtKB/TrEMBL;Acc:F4HVG0]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.