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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU81959 Sorghum vacuole 86.84 86.16
OQU81953 Sorghum endoplasmic reticulum, vacuole 88.02 85.17
Zm00001d003046_P001 Maize endoplasmic reticulum, vacuole 83.5 82.85
KXG26705 Sorghum cytosol, endoplasmic reticulum, vacuole 87.03 81.89
Zm00001d003045_P001 Maize endoplasmic reticulum, vacuole 72.5 81.82
Zm00001d003044_P001 Maize endoplasmic reticulum, vacuole 76.03 76.48
EES12501 Sorghum endoplasmic reticulum, extracellular, vacuole 59.73 59.03
GSMUA_Achr8P19060_001 Banana endoplasmic reticulum, vacuole 58.35 58.46
EES12502 Sorghum endoplasmic reticulum 58.74 57.28
OQU81967 Sorghum endoplasmic reticulum 58.55 56.76
EES12505 Sorghum vacuole 53.24 52.42
KXG26707 Sorghum mitochondrion 52.85 51.63
EES12506 Sorghum vacuole 51.67 51.57
KRH51056 Soybean endoplasmic reticulum 53.05 51.53
VIT_10s0116g00780.t01 Wine grape endoplasmic reticulum, vacuole 52.46 51.45
PGSC0003DMT400013037 Potato mitochondrion 41.85 51.2
Solyc03g031730.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 50.88 50.1
CDY68226 Canola cytosol, vacuole 42.63 49.54
AT1G61820.1 Thale cress endoplasmic reticulum, extracellular, vacuole 49.71 49.03
CDX79092 Canola cytosol, nucleus, vacuole 45.19 48.94
KRH11401 Soybean mitochondrion 52.26 48.45
CDY47163 Canola endoplasmic reticulum, vacuole 48.92 48.26
Bra028383.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 48.72 48.06
CDY25325 Canola endoplasmic reticulum, vacuole 45.19 48.02
CDX98704 Canola endoplasmic reticulum, extracellular, vacuole 47.54 47.92
Solyc02g080290.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 48.92 47.88
Bra031392.1-P Field mustard endoplasmic reticulum, vacuole 48.53 47.78
Bra038756.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 48.72 47.69
Bra013557.1-P Field mustard vacuole 48.33 47.67
Bra038755.1-P Field mustard endoplasmic reticulum, vacuole 48.72 47.6
CDX94055 Canola endoplasmic reticulum, extracellular, vacuole 48.53 47.59
CDY55219 Canola endoplasmic reticulum, vacuole 48.33 47.58
Solyc02g080310.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 48.53 47.5
Solyc02g080300.2.1 Tomato vacuole 48.13 47.48
AT4G21760.2 Thale cress cytosol, vacuole 49.9 46.61
CDX94056 Canola vacuole 46.56 44.8
CDY07263 Canola endoplasmic reticulum, vacuole 43.81 43.98
AT1G61810.3 Thale cress endoplasmic reticulum, vacuole 46.76 43.83
CDX98706 Canola cytosol 25.15 43.24
OQU87739 Sorghum vacuole 39.1 41.37
KXG35989 Sorghum vacuole 39.88 40.36
KXG21836 Sorghum endoplasmic reticulum, vacuole 41.45 40.19
EER89952 Sorghum endoplasmic reticulum, vacuole 42.24 39.67
KXG35991 Sorghum endoplasmic reticulum, extracellular, vacuole 42.04 39.63
EES18092 Sorghum endoplasmic reticulum, vacuole 38.7 38.7
KXG23299 Sorghum plastid 37.13 37.72
EES15867 Sorghum plastid 41.26 37.17
OQU78971 Sorghum plastid 40.67 36.96
CDY25326 Canola endoplasmic reticulum, extracellular, vacuole 48.33 35.6
EES16911 Sorghum cytosol 19.06 31.29
KRH51055 Soybean plastid 53.24 30.76
Protein Annotations
MapMan:21.6.3.2Gene3D:3.20.20.80UniProt:C5YC07EnsemblPlants:EES12493ProteinID:EES12493ProteinID:EES12493.2
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0005975GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016787InterPro:Glyco_hydro_1InterPro:Glyco_hydro_1_N_CSInterPro:Glycoside_hydrolase_SFPFAM:PF00232
PRINTS:PR00131ScanProsite:PS00653PANTHER:PTHR10353PANTHER:PTHR10353:SF54EnsemblPlantsGene:SORBI_3006G145300SUPFAM:SSF51445
SignalP:SignalP-noTMUniParc:UPI00081AC634SEG:seg:::
Description
hypothetical protein
Coordinates
chr6:-:50686769..50696303
Molecular Weight (calculated)
58261.4 Da
IEP (calculated)
6.676
GRAVY (calculated)
-0.308
Length
509 amino acids
Sequence
(BLAST)
001: MARLFFLLLL FPLLCSSVTG LRRSDFPPSF LFGAGTSAYQ VEGAYLEDNK GPSNWDVFTH IQGKIEDGSN GDVAADHYHR YKEDIEMMHS IGLDSYRFSL
101: SWSRILPKGR FGDVNLAGVQ FYNSLINGLL GKGIQPFVTI NHYDIPQELQ ERYGSWLSPE IQEDFIYFAE LCFKMFGDRV KHWVTFNEPN LMVKLAYFAG
201: GFPPSHCSEP YGKCDSGNSS TEPYIAAHNM ILAHAKAVNI YRKNYKAKQG GSIGITLHMR WYEPLRNITE DHLAVSRALS FEAQWFLDPL FFGEYPQQMH
301: KILGPNLPKF TEGEKQLLKK QIDFIGVNHY ETYYVKDCIY SQCDLDLYTC VALVSESSER NGMPIGKLTP ANSYVVPSSM EKLVMYLEQR YKSIPLYITE
401: NGYAQIGNSS TTTEELINDN GRSGYIGDYL TYLSFAIRKG ADVRGYFVWS LMDTFEWNSG YTAKYGLFHV DFKSLKRTPR LSAKWYSKFI KGYEQIEMVS
501: EESPKHMVS
Best Arabidopsis Sequence Match ( AT1G61810.3 )
(BLAST)
001: MKNLTSFVIV ILLQSLLFHV YGRHQSSSKN ILVDSSPFPS DFLFGTASSA YQYEGAFLTD GKSLNNWDVF THKNPGKILD KNNADRAVDQ YNRFLEDIQL
101: MSFLGVNSYR FSISWCRILP RGRFGEINYL GIKYYNIFID ALISRGIKPF VTLNHVDYPQ ELEDRFQSWL NPEMQKEFGY LADICFKHFG NRVKYWTTLN
201: EPNQQLILGY LTGKFPPSRC SSPYGNCSQG NSETEPFIAA HNMILAHAKA VNIYKTKYQK EQKGSIGIVV QTSWFEPISD SNADKEAAER AQSFYSNWIL
301: DPVIYGKYPK EMVDILGPAL PQFSSNEVKN LEKSRADFVG INHYTSYFIQ DCLTSACNTG HGAFKAEGYA LKLDRKGNVT IGELTDVNWQ HIDPTGFHKM
401: LNYLKDRYPN MPMFITENGF GDLQKPETTD KELLNDTKRI QYMSGYLEAL QAAMRDGANV KGYFVWSLLD NFEWLFGYKV RFGLFHVDLT TLKRSKLRYE
501: TSDDSYEARS SHVTNHILSR RNTNPFTKWV NVLRRTSTSC TKP
Arabidopsis Description
BGLU45Beta-glucosidase 45 [Source:UniProtKB/TrEMBL;Acc:F4HVG0]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.