Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 6
  • plasma membrane 5
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G088940.4 Barley endoplasmic reticulum, vacuole 72.95 73.8
TraesCS2B01G401600.1 Wheat cytosol 46.67 72.27
TraesCS2A01G384600.1 Wheat endoplasmic reticulum, vacuole 71.24 72.06
TraesCS2D01G381200.1 Wheat endoplasmic reticulum, vacuole 56.76 71.81
TraesCS2D01G381300.1 Wheat endoplasmic reticulum, vacuole 70.48 71.29
Os04t0513100-01 Rice endoplasmic reticulum, vacuole 69.33 70.54
EES12501 Sorghum endoplasmic reticulum, extracellular, vacuole 68.76 70.1
EES12502 Sorghum endoplasmic reticulum 66.48 66.86
HORVU1Hr1G010020.2 Barley plastid 47.05 62.85
GSMUA_Achr8P19060_001 Banana endoplasmic reticulum, vacuole 56.95 58.86
EES12493 Sorghum vacuole 56.76 58.55
OQU81959 Sorghum vacuole 56.19 57.5
KXG26705 Sorghum cytosol, endoplasmic reticulum, vacuole 58.29 56.56
EES12506 Sorghum vacuole 53.71 55.29
PGSC0003DMT400013037 Potato mitochondrion 43.81 55.29
OQU81953 Sorghum endoplasmic reticulum, vacuole 54.1 53.99
KXG26707 Sorghum mitochondrion 53.52 53.93
EES12505 Sorghum vacuole 52.19 53.0
Solyc03g031730.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 51.24 52.03
VIT_10s0116g00780.t01 Wine grape endoplasmic reticulum, vacuole 51.05 51.64
Solyc02g080290.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 50.48 50.96
Solyc02g080300.2.1 Tomato vacuole 49.9 50.78
Solyc02g080310.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 49.9 50.38
CDX79092 Canola cytosol, nucleus, vacuole 44.95 50.21
CDY68226 Canola cytosol, vacuole 41.33 49.54
KRH51056 Soybean endoplasmic reticulum 48.0 48.09
KRH11401 Soybean mitochondrion 50.1 47.91
Bra013557.1-P Field mustard vacuole 46.67 47.48
Bra031392.1-P Field mustard endoplasmic reticulum, vacuole 46.1 46.81
AT1G61820.1 Thale cress endoplasmic reticulum, extracellular, vacuole 45.9 46.71
Bra028383.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 45.9 46.71
CDY47163 Canola endoplasmic reticulum, vacuole 45.71 46.51
Bra038755.1-P Field mustard endoplasmic reticulum, vacuole 46.1 46.45
CDY55219 Canola endoplasmic reticulum, vacuole 45.71 46.42
CDX98706 Canola cytosol 26.1 46.28
Bra038756.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 45.71 46.15
CDX98704 Canola endoplasmic reticulum, extracellular, vacuole 44.38 46.14
CDY25325 Canola endoplasmic reticulum, vacuole 42.1 46.14
CDX94055 Canola endoplasmic reticulum, extracellular, vacuole 45.33 45.86
AT4G21760.2 Thale cress cytosol, vacuole 46.29 44.59
CDX94056 Canola vacuole 43.62 43.29
CDY07263 Canola endoplasmic reticulum, vacuole 41.71 43.2
AT1G61810.3 Thale cress endoplasmic reticulum, vacuole 44.19 42.73
OQU87739 Sorghum vacuole 37.71 41.16
KXG35989 Sorghum vacuole 38.48 40.16
KXG21836 Sorghum endoplasmic reticulum, vacuole 39.62 39.62
KXG35991 Sorghum endoplasmic reticulum, extracellular, vacuole 40.57 39.44
EER89952 Sorghum endoplasmic reticulum, vacuole 38.86 37.64
EES18092 Sorghum endoplasmic reticulum, vacuole 36.19 37.33
EES15867 Sorghum plastid 38.86 36.11
KXG23299 Sorghum plastid 34.29 35.93
OQU78971 Sorghum plastid 38.1 35.71
CDY25326 Canola endoplasmic reticulum, extracellular, vacuole 45.52 34.59
EES16911 Sorghum cytosol 19.43 32.9
KRH51055 Soybean plastid 48.57 28.94
Protein Annotations
MapMan:21.6.3.2Gene3D:3.20.20.80UniProt:A0A1Z5RE31GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_1InterPro:Glyco_hydro_1_N_CS
InterPro:Glycoside_hydrolase_SFEnsemblPlants:OQU81967ProteinID:OQU81967ProteinID:OQU81967.1PFAM:PF00232PRINTS:PR00131
ScanProsite:PS00653PANTHER:PTHR10353PANTHER:PTHR10353:SF54EnsemblPlantsGene:SORBI_3006G145901SUPFAM:SSF51445SignalP:SignalP-noTM
UniParc:UPI000B8B9C0ASEG:seg::::
Description
hypothetical protein
Coordinates
chr6:-:50785877..50795359
Molecular Weight (calculated)
59236.3 Da
IEP (calculated)
5.880
GRAVY (calculated)
-0.167
Length
525 amino acids
Sequence
(BLAST)
001: MMAAEVVWLL LLLAHELLPC PCAASAVDRG QFPDSFLFGT STSAYQIEGA YLEGNRGLST WDVFSHKLGT IEDGSNGETT ADHYHHYLED IELMHSLGVN
101: SYRFSIRGQE FYQLLLVAGG QFGHVNLDGI AFYNDLIDAL LQKGIQPFVT ISHYDIPQEL EMRYGGWLSP EIQKDFGYFA EVCFKMFGDR VKFWITFNQA
201: NLSLKFSYMD GWYPPSRCSQ PFGNCGFGNS TTEPYIAGHN MILSHANAVS VYRKRYQEKQ GGHIGISICA IWYEPFGNTT ADILAVERAL SFGGPWFLDP
301: LILGDYPIEM RKILGSNLPE FKSKQKKLLK ATGLDFIGLN HYTTLYLKDC IFSPCEVDPV DGDARVFSSA VSDDGVLIGE ATGAPFYYSV PDGMEQVVMY
401: YKERYNNTPI YITENGYAQG SNSSMSAKDF TNDTPRINYI RDYLTFLASA IRNGADVRGY FIWSLLDCFE WTSGYTLRLG LCHVDFNTLK RTPKLSANWF
501: RKFLKGSLVG TRLRDKSSQL QHYTA
Best Arabidopsis Sequence Match ( AT1G61810.1 )
(BLAST)
001: MKNLTSFVIV ILLQSLLFHV YGRHQSSSKN ILVDSSPFPS DFLFGTASSA YQYEGAFLTD GKSLNNWDVF THKNPGKILD KNNADRAVDQ YNRFLEDIQL
101: MSFLGVNSYR FSISWCRILP RGRFGEINYL GIKYYNIFID ALISRGIKPF VTLNHVDYPQ ELEDRFQSWL NPEMQKEFGY LADICFKHFG NRVKYWTTLN
201: EPNQQLILGY LTGKFPPSRC SSPYGNCSQG NSETEPFIAA HNMILAHAKA VNIYKTKYQK EQKGSIGIVV QTSWFEPISD SNADKEAAER AQSFYSNWIL
301: DPVIYGKYPK EMVDILGPAL PQFSSNEVKN LEKSRADFVG INHYTSYFIQ DCLTSACNTG HGAFKAEGYA LKLDRKGNVT IGELTDVNWQ HIDPTGFHKM
401: LNYLKDRYPN MPMFITENGF GDLQKPETTD KELLNDTKRI QYMSGYLEAL QAAMRDGANV KGYFVWSLLD NFEWLFGYKV RFGLFHVDLT TLKRSPKQSA
501: SWYKNYIEEH VNRRDIVDNY
Arabidopsis Description
BGLU45Beta-glucosidase 45 [Source:UniProtKB/TrEMBL;Acc:F4HVG0]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.