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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G077920.1 Barley vacuole 76.48 80.51
Zm00001d021119_P008 Maize vacuole 85.0 80.39
TraesCS5B01G294600.1 Wheat endoplasmic reticulum, vacuole 76.3 80.16
TraesCS5A01G295200.1 Wheat endoplasmic reticulum, extracellular, vacuole 76.85 79.96
Os09t0511600-01 Rice vacuole 77.22 79.73
TraesCS5D01G302800.1 Wheat endoplasmic reticulum, extracellular, vacuole 76.3 79.69
TraesCS5B01G294700.1 Wheat endoplasmic reticulum 73.89 79.01
TraesCS5B01G294500.1 Wheat endoplasmic reticulum, mitochondrion, vacuole 75.74 78.81
TraesCS5D01G302700.1 Wheat vacuole 76.11 78.59
KXG35989 Sorghum vacuole 72.96 78.33
TraesCS5D01G302900.1 Wheat endoplasmic reticulum, extracellular, vacuole 74.26 78.32
TraesCS5A01G295300.1 Wheat vacuole 74.07 77.97
HORVU5Hr1G077790.6 Barley endoplasmic reticulum, vacuole 74.44 77.46
TraesCS5B01G294400.1 Wheat vacuole 74.81 77.25
TraesCS5D01G302600.1 Wheat vacuole 74.26 76.82
TraesCS5A01G295100.1 Wheat vacuole 74.26 76.67
HORVU5Hr1G077880.3 Barley cytosol, vacuole 25.37 74.46
Zm00001d050490_P001 Maize cytosol 26.48 69.42
HORVU5Hr1G077810.13 Barley plastid, vacuole 42.22 68.06
EER89952 Sorghum endoplasmic reticulum, vacuole 65.74 65.5
GSMUA_Achr11P... Banana endoplasmic reticulum, mitochondrion, vacuole 55.19 55.49
OQU87739 Sorghum vacuole 44.07 49.48
KXG21836 Sorghum endoplasmic reticulum, vacuole 47.22 48.57
EES18092 Sorghum endoplasmic reticulum, vacuole 42.78 45.38
EES12501 Sorghum endoplasmic reticulum, extracellular, vacuole 40.19 42.14
EES12493 Sorghum vacuole 39.63 42.04
EES12505 Sorghum vacuole 39.81 41.59
EES12506 Sorghum vacuole 38.52 40.78
KXG26707 Sorghum mitochondrion 39.26 40.69
EES12502 Sorghum endoplasmic reticulum 39.26 40.61
OQU81967 Sorghum endoplasmic reticulum 39.44 40.57
OQU81959 Sorghum vacuole 38.52 40.55
OQU81953 Sorghum endoplasmic reticulum, vacuole 38.89 39.92
KXG26705 Sorghum cytosol, endoplasmic reticulum, vacuole 39.26 39.19
KXG23299 Sorghum plastid 35.0 37.72
EES15867 Sorghum plastid 37.22 35.58
OQU78971 Sorghum plastid 36.67 35.36
EES16911 Sorghum cytosol 18.33 31.94
Protein Annotations
Gene3D:3.20.20.80MapMan:50.3.2UniProt:A0A1B6QDK6GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_1InterPro:Glyco_hydro_1_N_CS
InterPro:Glycoside_hydrolase_SFEnsemblPlants:KXG35991ProteinID:KXG35991ProteinID:KXG35991.1PFAM:PF00232PRINTS:PR00131
ScanProsite:PS00653PANTHER:PTHR10353PANTHER:PTHR10353:SF78EnsemblPlantsGene:SORBI_3002G261600SUPFAM:SSF51445SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI00022070DASEG:seg:::
Description
hypothetical protein
Coordinates
chr2:-:64681146..64686358
Molecular Weight (calculated)
60458.4 Da
IEP (calculated)
6.159
GRAVY (calculated)
-0.252
Length
540 amino acids
Sequence
(BLAST)
001: MMGKALVGSA VFLLLAALGA AGASAADITR ADFPAGFVFG VGSSAYQVEG AVAEDGRKPS IWDTFTHKGY SIDGATGDVT ADQYHKYKED VKLLHELGVD
101: AYRMSIAWPR LIPVQIGTQR DFSGCVVQLL LRYIDGRGAV NPKGLEYYNN LIDELLSYGI QPHVTIYHFD FPQALQDEYK GLLSPRFIED YTAYADVCFK
201: NFGDRVKYWS TVNEPNIETI GGFDQGILPP QRCSAPFGFG CDEGNSTTEP YIAAHHLVLA HASAVSLYRE KYQAEQGGRI GLTLLGWWYE PATETPDDIA
301: AAARMNDFHV GWFMHPMVYG DYPPVMRKNV GSRLPSFTNE EAKRVKGSFD FVGFNHYVAV YVKADLSRLD EKVRDYMADA AVAYDMPFLK SRNQFPFGLG
401: LTADFTTPTP WALKKMLKHL QVKYKNPAVM IHENGAAGQP DPSGVNTYDD EFRSQYLQDY IEATLQSIRN GSNVQGYFVW SFLDVFEYLF GYRLRFGVCG
501: VEFNSTARTR YQRHSAKWYS SFLRGGELRP VALPEGAYSQ
Best Arabidopsis Sequence Match ( AT1G02850.1 )
(BLAST)
001: MKLLSNSLMF LPLLALALTA VSSLKYSRND FPPGFVFGSG TSAYQVEGAA DEDGRTPSIW DVFAHAGHSG VAAGNVACDQ YHKYKEDVKL MADMGLEAYR
101: FSISWSRLLP SGRGPINPKG LQYYNNLIDE LITHGIQPHV TLHHFDLPQA LEDEYGGWLS QEIVRDFTAY ADTCFKEFGD RVSHWTTINE VNVFALGGYD
201: QGITPPARCS PPFGLNCTKG NSSIEPYIAV HNMLLAHASA TILYKQQYKA TARVNDFYIG WILHPLVFGD YPETMKTNVG SRLPAFTEEE SEQVKGAFDF
301: VGVINYMALY VKDNSSSLKP NLQDFNTDIA VEMTLVGNTS IENEYANTPW SLQQILLYVK ETYGNPPVYI LENGQMTPHS SSLVDTTRVK YLSSYIKAVL
401: HSLRKGSDVK GYFQWSLMDV FELFGGYERS FGLLYVDFKD PSLKRSPKLS AHWYSSFLKG TLHHPSYASS
Arabidopsis Description
BGLU11Beta-glucosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:B3H5Q1]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.