Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 100.0 | 95.52 |
| GSMUA_Achr8P09330_001 | Banana | cytosol | 73.44 | 41.96 |
| GSMUA_AchrUn_... | Banana | cytosol | 73.44 | 41.96 |
| GSMUA_Achr11P... | Banana | plastid | 65.62 | 28.97 |
| GSMUA_Achr11P... | Banana | cytosol | 15.62 | 12.05 |
| GSMUA_Achr11P... | Banana | extracellular | 4.69 | 3.37 |
Protein Annotations
| Gene3D:3.30.1330.30 | MapMan:35.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr11G10410_001 | EnsemblPlants:GSMUA_Achr11P10410_001 | EnsemblPlants:GSMUA_Achr11T10410_001 | InterPro:IPR029064 | InterPro:L30e-like |
| UniProt:M0RR21 | PANTHER:PTHR11449 | PANTHER:PTHR11449:SF9 | InterPro:Ribosomal_L30e | SUPFAM:SSF55315 | UniParc:UPI000294B444 |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G10410_001]
Coordinates
chr11:+:8231881..8232340
Molecular Weight (calculated)
7347.2 Da
IEP (calculated)
11.034
GRAVY (calculated)
-0.281
Length
64 amino acids
Sequence
(BLAST)
(BLAST)
1: MAPVKKAKKS TESINNRLAL VMKSGKYTLG YKTVLRSLRN SKGVCTFPHF PFNREFRCIL NIEL
001: MNSCKSLIRA SISSFPFVPL PNPNFSITFI SVRAFSPLSV LHPNSSCIVT ARRTFHGAVA LSPESLTEES PKDTVKGLLT TNRGEASSLM KMERRCSLSN
101: GEGDCRGSWF PYEDRFRCGE VHLSSREVLE AVSPHMMEER TDRFRRVVEN RSYSVCLVVE GLSDFGNISA AFRSADALGI QSVHVVSCDS SKRYNGNRHV
201: SMGAEKWLDI EFWDTPKECF KVLKSRGYRI ATTHLGMDTV SIYDMDWSCP TAIVVGNEGR
101: GEGDCRGSWF PYEDRFRCGE VHLSSREVLE AVSPHMMEER TDRFRRVVEN RSYSVCLVVE GLSDFGNISA AFRSADALGI QSVHVVSCDS SKRYNGNRHV
201: SMGAEKWLDI EFWDTPKECF KVLKSRGYRI ATTHLGMDTV SIYDMDWSCP TAIVVGNEGR
Arabidopsis Description
rRNA methylase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LXE4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.