Factsheet for GSMUA_Achr8P09330_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	99.11	99.11
Os01t0276000-01	Rice	cytosol, nucleus	84.82	85.59
Zm00001d014749_P001	Maize	plastid	83.93	83.93
Zm00001d008245_P001	Maize	plastid	83.93	83.93
EER90361	Sorghum	cytosol	83.93	83.93
GSMUA_Achr11P...	Banana	cytosol	61.61	83.13
EER90362	Sorghum	cytosol	83.04	83.04
EES18421	Sorghum	cytosol	83.04	83.04
VIT_13s0064g00850.t01	Wine grape	cytosol	81.25	81.25
TraesCS1D01G306800.1	Wheat	cytosol	78.57	78.57
TraesCS1B01G318200.1	Wheat	cytosol	78.57	78.57
TraesCS1A01G307400.1	Wheat	cytosol	78.57	78.57
Os05t0490100-01	Rice	cytosol, nucleus	78.57	78.57
TraesCS7B01G399800.1	Wheat	cytosol, golgi, plastid, unclear	76.79	78.18
TraesCS3A01G187900.1	Wheat	golgi, nucleus, unclear	76.79	76.11
TraesCS3B01G217500.1	Wheat	cytosol	76.79	76.11
TraesCS3D01G191800.1	Wheat	cytosol	76.79	76.11
Os01t0812800-01	Rice	cytosol	75.89	75.89
GSMUA_Achr11P...	Banana	nucleus	41.96	73.44
HORVU0Hr1G023290.1	Barley	cytosol	73.21	72.57
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	42.86	71.64
GSMUA_Achr11P...	Banana	plastid	90.18	69.66
HORVU1Hr1G068640.1	Barley	plasma membrane	78.57	64.23
TraesCS7D01G480000.2	Wheat	mitochondrion	63.39	60.17
Zm00001d038535_P001	Maize	cytosol	75.89	59.86
HORVU7Hr1G110660.1	Barley	plastid	75.0	47.19
GSMUA_Achr11P...	Banana	extracellular	25.0	31.46

Protein Annotations

MapMan:17.1.2.1.31	Gene3D:3.30.1330.30	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G09330_001	EnsemblPlants:GSMUA_Achr8P09330_001	EnsemblPlants:GSMUA_Achr8T09330_001	InterPro:IPR029064	InterPro:L30e-like
UniProt:M0TNY6	PFAM:PF01248	ScanProsite:PS00709	ScanProsite:PS00993	PANTHER:PTHR11449	PANTHER:PTHR11449:SF9
InterPro:Ribosomal_L30e	InterPro:Ribosomal_L30e_CS	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	SUPFAM:SSF55315	UniParc:UPI0002962EA5	:

Description

60S ribosomal protein L30 [Source:GMGC_GENE;Acc:GSMUA_Achr8G09330_001]

Coordinates

chr8:+:6511696..6515007

Molecular Weight (calculated)

12287.2 Da

IEP (calculated)

10.159

GRAVY (calculated)

-0.167

Length

112 amino acids

Sequence
(BLAST)

001: MAPVKKAKKS TESINNRLAL VMKSGKYTLG YKTVLRSLRS SKAKLVMISN NCPPLRKSEI EYYAMLAKVG VHHFSGSNVD LGTACGKYFR VCCLSIIDPG
101: DSDIIKSMPG EQ

Best Arabidopsis Sequence Match ( AT1G77940.1 )
(BLAST)

001: MVTEKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRG SKGKLILIST NCPPLRRSEI EYYAMLAKVG VHHYNGNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSIPG DQ

Arabidopsis Description

RPL30B60S ribosomal protein L30-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.