Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- cytosol 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 35.96 | 38.55 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.58 | 25.89 |
| PGSC0003DMT400048132 | Potato | cytosol | 32.58 | 25.89 |
| Solyc11g071490.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, nucleus | 32.58 | 25.89 |
| GSMUA_Achr8P09330_001 | Banana | cytosol | 31.46 | 25.0 |
| Solyc01g009100.2.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 31.46 | 25.0 |
| GSMUA_Achr11P... | Banana | plastid | 31.46 | 19.31 |
| TraesCS4B01G163300.1 | Wheat | plasma membrane | 8.99 | 10.39 |
| GSMUA_Achr11P... | Banana | nucleus | 3.37 | 4.69 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 3.37 | 4.48 |
Protein Annotations
| MapMan:17.1.2.1.31 | Gene3D:3.30.1330.30 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr11G11340_001 | EnsemblPlants:GSMUA_Achr11P11340_001 | EnsemblPlants:GSMUA_Achr11T11340_001 | InterPro:IPR029064 | InterPro:L30e-like |
| UniProt:M0RRB4 | PFAM:PF01248 | PANTHER:PTHR11449 | PANTHER:PTHR11449:SF1 | InterPro:Ribosomal_L30e | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 |
| SUPFAM:SSF55315 | UniParc:UPI000296A485 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G11340_001]
Coordinates
chr11:-:8986597..8988703
Molecular Weight (calculated)
10590.1 Da
IEP (calculated)
8.964
GRAVY (calculated)
0.221
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MCWLWCDWKL IIIANNCPPL RKSEIEYYAM LAKVGVHHFS GSKYFYVCLC TCSFNKETSF CQTLVFLAIH SSFVILKRNT RRSWCRHML
001: MVTEKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRG SKGKLILIST NCPPLRRSEI EYYAMLAKVG VHHYNGNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSIPG DQ
101: DSDIIKSIPG DQ
Arabidopsis Description
RPL30B60S ribosomal protein L30-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ19]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.