Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 70.34 | 91.07 |
| GSMUA_Achr8P09330_001 | Banana | cytosol | 69.66 | 90.18 |
| Zm00001d014749_P001 | Maize | plastid | 63.45 | 82.14 |
| Zm00001d008245_P001 | Maize | plastid | 63.45 | 82.14 |
| EER90361 | Sorghum | cytosol | 63.45 | 82.14 |
| Os01t0276000-01 | Rice | cytosol, nucleus | 62.76 | 81.98 |
| EER90362 | Sorghum | cytosol | 62.76 | 81.25 |
| GSMUA_Achr11P... | Banana | cytosol | 46.21 | 80.72 |
| VIT_13s0064g00850.t01 | Wine grape | cytosol | 62.07 | 80.36 |
| EES18421 | Sorghum | cytosol | 61.38 | 79.46 |
| TraesCS7B01G399800.1 | Wheat | cytosol, golgi, plastid, unclear | 57.93 | 76.36 |
| Os05t0490100-01 | Rice | cytosol, nucleus | 58.62 | 75.89 |
| TraesCS1D01G306800.1 | Wheat | cytosol | 57.93 | 75.0 |
| TraesCS1B01G318200.1 | Wheat | cytosol | 57.93 | 75.0 |
| TraesCS1A01G307400.1 | Wheat | cytosol | 57.93 | 75.0 |
| Os01t0812800-01 | Rice | cytosol | 56.55 | 73.21 |
| TraesCS3A01G187900.1 | Wheat | golgi, nucleus, unclear | 56.55 | 72.57 |
| TraesCS3B01G217500.1 | Wheat | cytosol | 56.55 | 72.57 |
| TraesCS3D01G191800.1 | Wheat | cytosol | 56.55 | 72.57 |
| HORVU0Hr1G023290.1 | Barley | cytosol | 55.17 | 70.8 |
| GSMUA_Achr11P... | Banana | nucleus | 28.97 | 65.62 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 29.66 | 64.18 |
| HORVU1Hr1G068640.1 | Barley | plasma membrane | 59.31 | 62.77 |
| TraesCS7D01G480000.2 | Wheat | mitochondrion | 49.66 | 61.02 |
| Zm00001d038535_P001 | Maize | cytosol | 55.86 | 57.04 |
| HORVU7Hr1G110660.1 | Barley | plastid | 57.24 | 46.63 |
| GSMUA_Achr11P... | Banana | extracellular | 19.31 | 31.46 |
Protein Annotations
| MapMan:17.1.2.1.31 | Gene3D:3.30.1330.30 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr11G15620_001 | EnsemblPlants:GSMUA_Achr11P15620_001 | EnsemblPlants:GSMUA_Achr11T15620_001 | InterPro:IPR029064 | InterPro:L30e-like |
| UniProt:M0RSJ2 | PFAM:PF01248 | ScanProsite:PS00709 | ScanProsite:PS00993 | PANTHER:PTHR11449 | PANTHER:PTHR11449:SF9 |
| InterPro:Ribosomal_L30e | InterPro:Ribosomal_L30e_CS | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 | SUPFAM:SSF55315 | UniParc:UPI0002963835 | SEG:seg |
Description
60S ribosomal protein L30 [Source:GMGC_GENE;Acc:GSMUA_Achr11G15620_001]
Coordinates
chr11:-:17308519..17311778
Molecular Weight (calculated)
15718.4 Da
IEP (calculated)
10.505
GRAVY (calculated)
-0.230
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSYHPLGNP SERLSSRPPT LRRSILPSGL GAAMVAVKKA KKSTESVNNR LALVMKSGKY TLGHKTVLRS LRGSKAKLIL IANNCPPLRK SEIEYYAMLS
101: KVGVHHFNGS NVDLGTACGK YFRVCCLSIM DPGDSDIIKS MPGEQ
101: KVGVHHFNGS NVDLGTACGK YFRVCCLSIM DPGDSDIIKS MPGEQ
001: MVTEKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRG SKGKLILIST NCPPLRRSEI EYYAMLAKVG VHHYNGNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSIPG DQ
101: DSDIIKSIPG DQ
Arabidopsis Description
RPL30B60S ribosomal protein L30-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ19]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.