Factsheet for HORVU0Hr1G023290.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0490100-01	Rice	cytosol, nucleus	84.96	85.71
EES18421	Sorghum	cytosol	84.07	84.82
KRH69076	Soybean	nucleus	76.11	80.37
KRH01502	Soybean	cytosol, endoplasmic reticulum, nucleus	77.88	78.57
KRH45193	Soybean	cytosol	76.99	77.68
KRH31640	Soybean	cytosol, nucleus	76.99	77.68
VIT_13s0064g00850.t01	Wine grape	cytosol	76.11	76.79
Solyc11g071490.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	76.11	76.79
PGSC0003DMT400048132	Potato	cytosol	76.11	76.79
HORVU1Hr1G068640.1	Barley	plasma membrane	92.92	76.64
Solyc01g009100.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	73.45	74.11
GSMUA_AchrUn_...	Banana	cytosol	73.45	74.11
GSMUA_Achr8P09330_001	Banana	cytosol	72.57	73.21
Solyc04g072660.2.1	Tomato	nucleus	72.57	72.57
PGSC0003DMT400070814	Potato	cytosol	72.57	72.57
CDX82330	Canola	cytosol	70.8	71.43
AT3G18740.1	Thale cress	cytosol	70.8	71.43
Bra001719.1-P	Field mustard	cytosol	70.8	71.43
Bra022351.1-P	Field mustard	cytosol	70.8	71.43
Bra037566.1-P	Field mustard	cytosol	70.8	71.43
CDX75983	Canola	cytosol	70.8	71.43
CDY65281	Canola	cytosol	70.8	71.43
CDY18539	Canola	cytosol	70.8	71.43
CDX99322	Canola	cytosol	70.8	71.43
CDX92266	Canola	cytosol	70.8	71.43
CDX68035	Canola	extracellular	69.91	70.54
Bra003662.1-P	Field mustard	cytosol	69.91	70.54
CDX88400	Canola	cytosol	69.91	70.54
CDX87493	Canola	cytosol	69.91	70.54
CDX79241	Canola	cytosol	69.91	70.54
AT1G77940.1	Thale cress	cytosol	69.91	70.54
AT1G36240.1	Thale cress	cytosol	69.91	70.54
KRH20440	Soybean	cytosol, mitochondrion	46.02	68.42
CDY14643	Canola	cytosol	61.95	62.5
GSMUA_Achr11P...	Banana	plastid	70.8	55.17
HORVU7Hr1G110660.1	Barley	plastid	82.3	52.25

Protein Annotations

MapMan:17.1.2.1.31	Gene3D:3.30.1330.30	UniProt:A0A287E8A7	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU0Hr1G023290	EnsemblPlants:HORVU0Hr1G023290.1	InterPro:IPR029064	InterPro:L30e-like
PFAM:PF01248	ScanProsite:PS00709	ScanProsite:PS00993	PANTHER:PTHR11449	PANTHER:PTHR11449:SF6	InterPro:Ribosomal_L30e
InterPro:Ribosomal_L30e_CS	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	SUPFAM:SSF55315	UniParc:UPI000B47BD75	:	:

Description

No Description!

Coordinates

chrchrUn:-:117229631..117231394

Molecular Weight (calculated)

12453.2 Da

IEP (calculated)

9.659

GRAVY (calculated)

-0.240

Length

113 amino acids

Sequence
(BLAST)

001: QSIGCALQKK SGENINNKLQ LVMKSGKYTL GYKTVLKTLR SSKGKLIILA NNCPPLRKSE IEYYAMLAKI SVHHFHGNNV DLGTACGKYY RVCCLSILDP
101: GDSDIINTTT TTQ

Best Arabidopsis Sequence Match ( AT3G18740.1 )
(BLAST)

001: MVAEKKAKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRS SKGKLILISS NCPPLRRSEI EYYAMLAKVG VHRYNGNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKTLPG DQ

Arabidopsis Description

RPL30C60S ribosomal protein L30-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSA3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.