CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31640	Soybean	cytosol, nucleus	100.0	100.0
KRH01502	Soybean	cytosol, endoplasmic reticulum, nucleus	99.11	99.11
KRH69076	Soybean	nucleus	91.07	95.33
KRH20440	Soybean	cytosol, mitochondrion	62.5	92.11
VIT_07s0031g01230.t01	Wine grape	cytosol	91.96	91.96
CDX92266	Canola	cytosol	87.5	87.5
CDY65281	Canola	cytosol	87.5	87.5
CDY18539	Canola	cytosol	87.5	87.5
CDX99322	Canola	cytosol	87.5	87.5
CDX82330	Canola	cytosol	87.5	87.5
Bra001719.1-P	Field mustard	cytosol	87.5	87.5
CDX75983	Canola	cytosol	87.5	87.5
Bra022351.1-P	Field mustard	cytosol	87.5	87.5
Bra037566.1-P	Field mustard	cytosol	87.5	87.5
AT1G36240.1	Thale cress	cytosol	86.61	86.61
AT3G18740.1	Thale cress	cytosol	85.71	85.71
CDX87493	Canola	cytosol	84.82	84.82
Bra003662.1-P	Field mustard	cytosol	84.82	84.82
EES18421	Sorghum	cytosol	84.82	84.82
EER90361	Sorghum	cytosol	84.82	84.82
CDX68035	Canola	extracellular	84.82	84.82
Zm00001d014749_P001	Maize	plastid	84.82	84.82
CDX88400	Canola	cytosol	84.82	84.82
CDX79241	Canola	cytosol	84.82	84.82
PGSC0003DMT400070814	Potato	cytosol	84.82	84.07
Solyc04g072660.2.1	Tomato	nucleus	84.82	84.07
AT1G77940.1	Thale cress	cytosol	83.93	83.93
Zm00001d008245_P001	Maize	plastid	83.93	83.93
EER90362	Sorghum	cytosol	83.93	83.93
Os01t0276000-01	Rice	cytosol, nucleus	83.04	83.78
TraesCS1A01G307400.1	Wheat	cytosol	80.36	80.36
TraesCS1D01G306800.1	Wheat	cytosol	80.36	80.36
Os05t0490100-01	Rice	cytosol, nucleus	79.46	79.46
Os01t0812800-01	Rice	cytosol	78.57	78.57
HORVU0Hr1G023290.1	Barley	cytosol	77.68	76.99
TraesCS3A01G187900.1	Wheat	golgi, nucleus, unclear	75.89	75.22
TraesCS3D01G191800.1	Wheat	cytosol	75.89	75.22
CDY14643	Canola	cytosol	75.0	75.0
HORVU1Hr1G068640.1	Barley	plasma membrane	80.36	65.69
TraesCS7D01G480000.2	Wheat	mitochondrion	68.75	65.25
VIT_18s0001g04760.t01	Wine grape	plastid	83.93	61.04
Zm00001d038535_P001	Maize	cytosol	76.79	60.56
HORVU7Hr1G110660.1	Barley	plastid	76.79	48.31

Protein Annotations

EntrezGene:100499680	EntrezGene:100793713	MapMan:17.1.2.1.31	Gene3D:3.30.1330.30	EMBL:ACUP02005008	EMBL:ACUP02006073
EnsemblPlantsGene:GLYMA_08G257100	GO:GO:0002181	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	UniProt:I1L7D4	InterPro:IPR029064	ProteinID:KRH31640.1
EnsemblPlants:KRH45193	ProteinID:KRH45193	ProteinID:KRH45193.1	InterPro:L30e-like	HAMAP:MF_00481	PFAM:PF01248
ScanProsite:PS00709	ScanProsite:PS00993	PANTHER:PTHR11449	PANTHER:PTHR11449:SF9	InterPro:Ribosomal_L30e	InterPro:Ribosomal_L30e_CS
InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	SUPFAM:SSF55315	UniParc:UPI000233D7FF	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:23077996..23079674

Molecular Weight (calculated)

12345.2 Da

IEP (calculated)

10.074

GRAVY (calculated)

-0.212

Length

112 amino acids

Sequence
(BLAST)

001: MVAAKKTKKT HESINNRLAL VMKSGKFTLG YKTVLKSLRS SKGKLIIIAN NCPPLRKSEI EYYAMLAKVG VHHYNGNNVD LGTACGKYYR VCCLSIIDPG
101: DSDIIKTLPG EQ

Best Arabidopsis Sequence Match ( AT1G36240.1 )
(BLAST)

001: MVAAKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRS SKGKLILISS NCPPLRRSEI EYYAMLAKVG VHHYNRNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSLPG DQ

Arabidopsis Description

RPL30APutative 60S ribosomal protein L30-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8F7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.