Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G306800.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS1B01G318200.1 | Wheat | cytosol | 100.0 | 100.0 |
| Os05t0490100-01 | Rice | cytosol, nucleus | 91.07 | 91.07 |
| EES18421 | Sorghum | cytosol | 91.07 | 91.07 |
| TraesCS3A01G187900.1 | Wheat | golgi, nucleus, unclear | 83.93 | 83.19 |
| KRH01502 | Soybean | cytosol, endoplasmic reticulum, nucleus | 81.25 | 81.25 |
| HORVU1Hr1G068640.1 | Barley | plasma membrane | 99.11 | 81.02 |
| KRH45193 | Soybean | cytosol | 80.36 | 80.36 |
| KRH31640 | Soybean | cytosol, nucleus | 80.36 | 80.36 |
| VIT_13s0064g00850.t01 | Wine grape | cytosol | 80.36 | 80.36 |
| Solyc11g071490.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, nucleus | 79.46 | 79.46 |
| PGSC0003DMT400048132 | Potato | cytosol | 79.46 | 79.46 |
| GSMUA_AchrUn_... | Banana | cytosol | 79.46 | 79.46 |
| KRH69076 | Soybean | nucleus | 75.89 | 79.44 |
| GSMUA_Achr8P09330_001 | Banana | cytosol | 78.57 | 78.57 |
| Solyc01g009100.2.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 76.79 | 76.79 |
| AT3G18740.1 | Thale cress | cytosol | 75.0 | 75.0 |
| Solyc04g072660.2.1 | Tomato | nucleus | 75.0 | 74.34 |
| PGSC0003DMT400070814 | Potato | cytosol | 75.0 | 74.34 |
| Bra037566.1-P | Field mustard | cytosol | 74.11 | 74.11 |
| Bra001719.1-P | Field mustard | cytosol | 74.11 | 74.11 |
| CDY65281 | Canola | cytosol | 74.11 | 74.11 |
| CDY18539 | Canola | cytosol | 74.11 | 74.11 |
| CDX99322 | Canola | cytosol | 74.11 | 74.11 |
| CDX92266 | Canola | cytosol | 74.11 | 74.11 |
| CDX82330 | Canola | cytosol | 74.11 | 74.11 |
| CDX75983 | Canola | cytosol | 74.11 | 74.11 |
| Bra022351.1-P | Field mustard | cytosol | 74.11 | 74.11 |
| Bra003662.1-P | Field mustard | cytosol | 73.21 | 73.21 |
| AT1G36240.1 | Thale cress | cytosol | 73.21 | 73.21 |
| CDX88400 | Canola | cytosol | 73.21 | 73.21 |
| CDX87493 | Canola | cytosol | 73.21 | 73.21 |
| CDX79241 | Canola | cytosol | 73.21 | 73.21 |
| CDX68035 | Canola | extracellular | 73.21 | 73.21 |
| AT1G77940.1 | Thale cress | cytosol | 73.21 | 73.21 |
| KRH20440 | Soybean | cytosol, mitochondrion | 47.32 | 69.74 |
| Zm00001d038535_P001 | Maize | cytosol | 83.04 | 65.49 |
| CDY14643 | Canola | cytosol | 65.18 | 65.18 |
| GSMUA_Achr11P... | Banana | plastid | 75.0 | 57.93 |
Protein Annotations
| MapMan:17.1.2.1.31 | Gene3D:3.30.1330.30 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR029064 | InterPro:L30e-like |
| PFAM:PF01248 | ScanProsite:PS00709 | ScanProsite:PS00993 | PANTHER:PTHR11449 | PANTHER:PTHR11449:SF6 | InterPro:Ribosomal_L30e |
| InterPro:Ribosomal_L30e_CS | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 | SUPFAM:SSF55315 | EnsemblPlantsGene:TraesCS1A01G307400 | EnsemblPlants:TraesCS1A01G307400.1 | SEG:seg |
Description
No Description!
Coordinates
chr1A:+:498809405..498811345
Molecular Weight (calculated)
12353.2 Da
IEP (calculated)
10.074
GRAVY (calculated)
-0.298
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTKKAKKS GENINNKLQL VMKSGKYTLG YKTVLKTLRS SKGKLIILAN NCPPLRKSEI EYYAMLAKIS VHHFHGNNVD LGTACGKYYR VCCLSILDPG
101: DSDIISTTTT TQ
101: DSDIISTTTT TQ
001: MVAAKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRS SKGKLILISS NCPPLRRSEI EYYAMLAKVG VHHYNRNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSLPG DQ
101: DSDIIKSLPG DQ
Arabidopsis Description
RPL30APutative 60S ribosomal protein L30-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8F7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.