Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G306800.1 | Wheat | cytosol | 91.07 | 91.07 |
| TraesCS1B01G318200.1 | Wheat | cytosol | 91.07 | 91.07 |
| TraesCS1A01G307400.1 | Wheat | cytosol | 91.07 | 91.07 |
| Os05t0490100-01 | Rice | cytosol, nucleus | 91.07 | 91.07 |
| TraesCS7B01G399800.1 | Wheat | cytosol, golgi, plastid, unclear | 89.29 | 90.91 |
| EER90361 | Sorghum | cytosol | 87.5 | 87.5 |
| EER90362 | Sorghum | cytosol | 86.61 | 86.61 |
| KRH69076 | Soybean | nucleus | 82.14 | 85.98 |
| Solyc11g071490.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, nucleus | 85.71 | 85.71 |
| PGSC0003DMT400048132 | Potato | cytosol | 85.71 | 85.71 |
| KRH01502 | Soybean | cytosol, endoplasmic reticulum, nucleus | 85.71 | 85.71 |
| KRH45193 | Soybean | cytosol | 84.82 | 84.82 |
| KRH31640 | Soybean | cytosol, nucleus | 84.82 | 84.82 |
| HORVU0Hr1G023290.1 | Barley | cytosol | 84.82 | 84.07 |
| GSMUA_AchrUn_... | Banana | cytosol | 83.93 | 83.93 |
| GSMUA_Achr8P09330_001 | Banana | cytosol | 83.04 | 83.04 |
| VIT_13s0064g00850.t01 | Wine grape | cytosol | 81.25 | 81.25 |
| PGSC0003DMT400070814 | Potato | cytosol | 81.25 | 80.53 |
| Solyc04g072660.2.1 | Tomato | nucleus | 81.25 | 80.53 |
| Solyc01g009100.2.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 80.36 | 80.36 |
| AT1G77940.1 | Thale cress | cytosol | 76.79 | 76.79 |
| CDY65281 | Canola | cytosol | 76.79 | 76.79 |
| AT3G18740.1 | Thale cress | cytosol | 76.79 | 76.79 |
| Bra001719.1-P | Field mustard | cytosol | 76.79 | 76.79 |
| Bra003662.1-P | Field mustard | cytosol | 76.79 | 76.79 |
| Bra022351.1-P | Field mustard | cytosol | 76.79 | 76.79 |
| Bra037566.1-P | Field mustard | cytosol | 76.79 | 76.79 |
| CDX68035 | Canola | extracellular | 76.79 | 76.79 |
| CDX75983 | Canola | cytosol | 76.79 | 76.79 |
| CDX79241 | Canola | cytosol | 76.79 | 76.79 |
| CDX82330 | Canola | cytosol | 76.79 | 76.79 |
| CDX87493 | Canola | cytosol | 76.79 | 76.79 |
| CDX88400 | Canola | cytosol | 76.79 | 76.79 |
| CDX92266 | Canola | cytosol | 76.79 | 76.79 |
| CDX99322 | Canola | cytosol | 76.79 | 76.79 |
| CDY18539 | Canola | cytosol | 76.79 | 76.79 |
| KRH20440 | Soybean | cytosol, mitochondrion | 51.79 | 76.32 |
| AT1G36240.1 | Thale cress | cytosol | 75.89 | 75.89 |
| HORVU1Hr1G068640.1 | Barley | plasma membrane | 90.18 | 73.72 |
| Zm00001d038535_P001 | Maize | cytosol | 89.29 | 70.42 |
| TraesCS7D01G480000.2 | Wheat | mitochondrion | 72.32 | 68.64 |
| CDY14643 | Canola | cytosol | 67.86 | 67.86 |
| GSMUA_Achr11P... | Banana | plastid | 79.46 | 61.38 |
Protein Annotations
| MapMan:17.1.2.1.31 | Gene3D:3.30.1330.30 | EntrezGene:8077032 | UniProt:C5YZY2 | EnsemblPlants:EES18421 | ProteinID:EES18421 |
| ProteinID:EES18421.1 | GO:GO:0002181 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022625 | InterPro:IPR029064 | InterPro:L30e-like | HAMAP:MF_00481 |
| PFAM:PF01248 | ScanProsite:PS00709 | ScanProsite:PS00993 | PANTHER:PTHR11449 | PANTHER:PTHR11449:SF6 | InterPro:Ribosomal_L30e |
| InterPro:Ribosomal_L30e_CS | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 | EnsemblPlantsGene:SORBI_3009G179100 | SUPFAM:SSF55315 | unigene:Sbi.6962 | UniParc:UPI000182D076 |
| RefSeq:XP_002439991.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:53379227..53381420
Molecular Weight (calculated)
12351.1 Da
IEP (calculated)
10.074
GRAVY (calculated)
-0.320
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTKKSKKS TESINNKLQL VMKSGKYTLG YKTVLKTLRN SKGKLIIIAN NCPPLRKSEI EYYAMLAKVS VHHFHGNNVD LGTACGKYYR VCCLSIIDPG
101: DSDIISTTPG TQ
101: DSDIISTTPG TQ
001: MVTEKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRG SKGKLILIST NCPPLRRSEI EYYAMLAKVG VHHYNGNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSIPG DQ
101: DSDIIKSIPG DQ
Arabidopsis Description
RPL30B60S ribosomal protein L30-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ19]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.