Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003662.1-P | Field mustard | cytosol | 98.21 | 98.21 |
| CDX68035 | Canola | extracellular | 98.21 | 98.21 |
| CDX79241 | Canola | cytosol | 98.21 | 98.21 |
| CDX87493 | Canola | cytosol | 98.21 | 98.21 |
| CDX88400 | Canola | cytosol | 98.21 | 98.21 |
| AT1G36240.1 | Thale cress | cytosol | 94.64 | 94.64 |
| AT3G18740.1 | Thale cress | cytosol | 93.75 | 93.75 |
| CDY14643 | Canola | cytosol | 87.5 | 87.5 |
| KRH01502 | Soybean | cytosol, endoplasmic reticulum, nucleus | 84.82 | 84.82 |
| KRH31640 | Soybean | cytosol, nucleus | 83.93 | 83.93 |
| KRH45193 | Soybean | cytosol | 83.93 | 83.93 |
| Solyc04g072660.2.1 | Tomato | nucleus | 83.93 | 83.19 |
| PGSC0003DMT400070814 | Potato | cytosol | 83.93 | 83.19 |
| KRH69076 | Soybean | nucleus | 79.46 | 83.18 |
| Os01t0276000-01 | Rice | cytosol, nucleus | 76.79 | 77.48 |
| Zm00001d008245_P001 | Maize | plastid | 76.79 | 76.79 |
| EER90361 | Sorghum | cytosol | 76.79 | 76.79 |
| EES18421 | Sorghum | cytosol | 76.79 | 76.79 |
| Zm00001d014749_P001 | Maize | plastid | 76.79 | 76.79 |
| EER90362 | Sorghum | cytosol | 75.89 | 75.89 |
| KRH20440 | Soybean | cytosol, mitochondrion | 50.0 | 73.68 |
| Os01t0812800-01 | Rice | cytosol | 73.21 | 73.21 |
| TraesCS1A01G307400.1 | Wheat | cytosol | 73.21 | 73.21 |
| TraesCS1D01G306800.1 | Wheat | cytosol | 73.21 | 73.21 |
| Os05t0490100-01 | Rice | cytosol, nucleus | 72.32 | 72.32 |
| TraesCS3A01G187900.1 | Wheat | golgi, nucleus, unclear | 71.43 | 70.8 |
| TraesCS3D01G191800.1 | Wheat | cytosol | 71.43 | 70.8 |
| HORVU0Hr1G023290.1 | Barley | cytosol | 70.54 | 69.91 |
| VIT_18s0001g04760.t01 | Wine grape | plastid | 83.93 | 61.04 |
| HORVU1Hr1G068640.1 | Barley | plasma membrane | 73.21 | 59.85 |
| TraesCS7D01G480000.2 | Wheat | mitochondrion | 61.61 | 58.47 |
| Zm00001d038535_P001 | Maize | cytosol | 69.64 | 54.93 |
| HORVU7Hr1G110660.1 | Barley | plastid | 69.64 | 43.82 |
Protein Annotations
| MapMan:17.1.2.1.31 | Gene3D:3.30.1330.30 | EntrezGene:844129 | UniProt:A0A178WES2 | ProteinID:AAF17698.1 | ProteinID:AEE36049.1 |
| EMBL:AK228037 | ArrayExpress:AT1G77940 | EnsemblPlantsGene:AT1G77940 | RefSeq:AT1G77940 | TAIR:AT1G77940 | RefSeq:AT1G77940-TAIR-G |
| EnsemblPlants:AT1G77940.1 | TAIR:AT1G77940.1 | EMBL:AY065370 | EMBL:AY085881 | EMBL:AY114036 | EMBL:BT004749 |
| GO:GO:0002181 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0022625 | GO:GO:0022626 | GO:GO:0030529 | InterPro:IPR029064 | InterPro:L30e-like |
| RefSeq:NP_565164.1 | ProteinID:OAP15873.1 | ProteinID:OAP19160.1 | PFAM:PF01248 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00709 | ScanProsite:PS00993 | PANTHER:PTHR11449 |
| PANTHER:PTHR11449:SF8 | UniProt:Q0WSA0 | UniProt:Q8VZ19 | InterPro:Ribosomal_L30e | InterPro:Ribosomal_L30e_CS | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 |
| SUPFAM:SSF55315 | UniParc:UPI000000C463 | : | : | : | : |
Description
RPL30B60S ribosomal protein L30-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ19]
Coordinates
chr1:-:29303864..29305411
Molecular Weight (calculated)
12291.1 Da
IEP (calculated)
10.090
GRAVY (calculated)
-0.289
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTEKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRG SKGKLILIST NCPPLRRSEI EYYAMLAKVG VHHYNGNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSIPG DQ
101: DSDIIKSIPG DQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.