Factsheet for HORVU7Hr1G110660.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G023290.1	Barley	cytosol	52.25	82.3
KRH01502	Soybean	cytosol, endoplasmic reticulum, nucleus	48.88	77.68
HORVU1Hr1G068640.1	Barley	plasma membrane	59.55	77.37
KRH31640	Soybean	cytosol, nucleus	48.31	76.79
KRH45193	Soybean	cytosol	48.31	76.79
VIT_13s0064g00850.t01	Wine grape	cytosol	48.31	76.79
Solyc11g071490.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	47.75	75.89
GSMUA_AchrUn_...	Banana	cytosol	47.75	75.89
PGSC0003DMT400048132	Potato	cytosol	47.75	75.89
KRH69076	Soybean	nucleus	45.51	75.7
GSMUA_Achr8P09330_001	Banana	cytosol	47.19	75.0
Solyc01g009100.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	46.07	73.21
Solyc04g072660.2.1	Tomato	nucleus	46.07	72.57
PGSC0003DMT400070814	Potato	cytosol	46.07	72.57
CDX92266	Canola	cytosol	44.94	71.43
CDY65281	Canola	cytosol	44.94	71.43
CDY18539	Canola	cytosol	44.94	71.43
CDX99322	Canola	cytosol	44.94	71.43
CDX82330	Canola	cytosol	44.94	71.43
CDX75983	Canola	cytosol	44.94	71.43
Bra037566.1-P	Field mustard	cytosol	44.94	71.43
Bra022351.1-P	Field mustard	cytosol	44.94	71.43
Bra001719.1-P	Field mustard	cytosol	44.94	71.43
AT3G18740.1	Thale cress	cytosol	44.38	70.54
AT1G36240.1	Thale cress	cytosol	44.38	70.54
Zm00001d038535_P001	Maize	cytosol	56.18	70.42
CDX88400	Canola	cytosol	43.82	69.64
CDX87493	Canola	cytosol	43.82	69.64
CDX79241	Canola	cytosol	43.82	69.64
CDX68035	Canola	extracellular	43.82	69.64
Bra003662.1-P	Field mustard	cytosol	43.82	69.64
AT1G77940.1	Thale cress	cytosol	43.82	69.64
KRH20440	Soybean	cytosol, mitochondrion	27.53	64.47
CDY14643	Canola	cytosol	39.33	62.5
GSMUA_Achr11P...	Banana	plastid	46.63	57.24

Protein Annotations

MapMan:17.1.2.1.31	Gene3D:3.30.1330.30	UniProt:A0A287XTC6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G110660	EnsemblPlants:HORVU7Hr1G110660.1	InterPro:IPR029064	InterPro:L30e-like
PFAM:PF01248	ScanProsite:PS00709	ScanProsite:PS00993	PANTHER:PTHR11449	PANTHER:PTHR11449:SF6	InterPro:Ribosomal_L30e
InterPro:Ribosomal_L30e_CS	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	SUPFAM:SSF55315	UniParc:UPI000B481413	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:+:631162565..631164897

Molecular Weight (calculated)

19461.8 Da

IEP (calculated)

10.367

GRAVY (calculated)

-0.246

Length

178 amino acids

Sequence
(BLAST)

001: APPPPKKPPA SSSSSLAAAR RGWSPDAMAP TKKSKKSTEN INNKLQLVMK SGKYTLGYKT VLKTLRSSKG KLIILANNCP PLRKSEIEYY AMLAKISVHH
101: FHGNNVDLGT ACGKYYRVCC LSILDPGSSL LNSKLSGHLS FALLTLLSIY HTCFQVTRTS SPPFLSEDNL TYPSLKTM

Best Arabidopsis Sequence Match ( AT1G77940.1 )
(BLAST)

001: MVTEKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRG SKGKLILIST NCPPLRRSEI EYYAMLAKVG VHHYNGNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSIPG DQ

Arabidopsis Description

RPL30B60S ribosomal protein L30-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.