Factsheet for GSMUA_AchrUn_randomP12180_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P09330_001	Banana	cytosol	99.11	99.11
Zm00001d014749_P001	Maize	plastid	84.82	84.82
Zm00001d008245_P001	Maize	plastid	84.82	84.82
EER90361	Sorghum	cytosol	84.82	84.82
Os01t0276000-01	Rice	cytosol, nucleus	83.93	84.68
GSMUA_Achr11P...	Banana	cytosol	62.5	84.34
EER90362	Sorghum	cytosol	83.93	83.93
EES18421	Sorghum	cytosol	83.93	83.93
VIT_13s0064g00850.t01	Wine grape	cytosol	80.36	80.36
TraesCS1D01G306800.1	Wheat	cytosol	79.46	79.46
TraesCS1B01G318200.1	Wheat	cytosol	79.46	79.46
TraesCS1A01G307400.1	Wheat	cytosol	79.46	79.46
Os05t0490100-01	Rice	cytosol, nucleus	79.46	79.46
TraesCS7B01G399800.1	Wheat	cytosol, golgi, plastid, unclear	77.68	79.09
TraesCS3A01G187900.1	Wheat	golgi, nucleus, unclear	77.68	76.99
TraesCS3B01G217500.1	Wheat	cytosol	77.68	76.99
TraesCS3D01G191800.1	Wheat	cytosol	77.68	76.99
Os01t0812800-01	Rice	cytosol	76.79	76.79
HORVU0Hr1G023290.1	Barley	cytosol	74.11	73.45
GSMUA_Achr11P...	Banana	nucleus	41.96	73.44
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	42.86	71.64
GSMUA_Achr11P...	Banana	plastid	91.07	70.34
HORVU1Hr1G068640.1	Barley	plasma membrane	79.46	64.96
TraesCS7D01G480000.2	Wheat	mitochondrion	64.29	61.02
Zm00001d038535_P001	Maize	cytosol	76.79	60.56
HORVU7Hr1G110660.1	Barley	plastid	75.89	47.75
GSMUA_Achr11P...	Banana	extracellular	25.89	32.58

Protein Annotations

MapMan:17.1.2.1.31	Gene3D:3.30.1330.30	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	EnsemblPlantsGene:GSMUA_AchrUn_randomG12180_001	EnsemblPlants:GSMUA_AchrUn_randomP12180_001	EnsemblPlants:GSMUA_AchrUn_randomT12180_001	InterPro:IPR029064	InterPro:L30e-like
UniProt:M0U8H7	PFAM:PF01248	ScanProsite:PS00709	ScanProsite:PS00993	PANTHER:PTHR11449	PANTHER:PTHR11449:SF9
InterPro:Ribosomal_L30e	InterPro:Ribosomal_L30e_CS	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	SUPFAM:SSF55315	UniParc:UPI000296BAF1	:

Description

60S ribosomal protein L30 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG12180_001]

Coordinates

chrchrUn_random:+:58229022..58231570

Molecular Weight (calculated)

12271.2 Da

IEP (calculated)

10.159

GRAVY (calculated)

-0.144

Length

112 amino acids

Sequence
(BLAST)

001: MAPVKKAKKS TESINNRLAL VMKSGKYTLG YKTVLRSLRS SKAKLVMIAN NCPPLRKSEI EYYAMLAKVG VHHFSGSNVD LGTACGKYFR VCCLSIIDPG
101: DSDIIKSMPG EQ

Best Arabidopsis Sequence Match ( AT1G77940.1 )
(BLAST)

001: MVTEKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRG SKGKLILIST NCPPLRRSEI EYYAMLAKVG VHHYNGNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSIPG DQ

Arabidopsis Description

RPL30B60S ribosomal protein L30-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.