Factsheet for TraesCS7D01G480000.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G399800.1	Wheat	cytosol, golgi, plastid, unclear	73.73	79.09
TraesCS1D01G306800.1	Wheat	cytosol	71.19	75.0
Os05t0490100-01	Rice	cytosol, nucleus	68.64	72.32
EES18421	Sorghum	cytosol	68.64	72.32
KRH69076	Soybean	nucleus	63.56	70.09
KRH01502	Soybean	cytosol, endoplasmic reticulum, nucleus	66.1	69.64
VIT_13s0064g00850.t01	Wine grape	cytosol	65.25	68.75
KRH45193	Soybean	cytosol	65.25	68.75
KRH31640	Soybean	cytosol, nucleus	65.25	68.75
Solyc11g071490.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	64.41	67.86
PGSC0003DMT400048132	Potato	cytosol	64.41	67.86
TraesCS3D01G191800.1	Wheat	cytosol	63.56	66.37
Solyc01g009100.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	61.86	65.18
Solyc04g072660.2.1	Tomato	nucleus	61.86	64.6
PGSC0003DMT400070814	Potato	cytosol	61.86	64.6
GSMUA_AchrUn_...	Banana	cytosol	61.02	64.29
GSMUA_Achr8P09330_001	Banana	cytosol	60.17	63.39
CDX82330	Canola	cytosol	59.32	62.5
AT3G18740.1	Thale cress	cytosol	59.32	62.5
Bra001719.1-P	Field mustard	cytosol	59.32	62.5
Bra022351.1-P	Field mustard	cytosol	59.32	62.5
Bra037566.1-P	Field mustard	cytosol	59.32	62.5
CDX75983	Canola	cytosol	59.32	62.5
CDY65281	Canola	cytosol	59.32	62.5
CDY18539	Canola	cytosol	59.32	62.5
CDX99322	Canola	cytosol	59.32	62.5
CDX92266	Canola	cytosol	59.32	62.5
CDX68035	Canola	extracellular	58.47	61.61
CDX79241	Canola	cytosol	58.47	61.61
AT1G36240.1	Thale cress	cytosol	58.47	61.61
Bra003662.1-P	Field mustard	cytosol	58.47	61.61
AT1G77940.1	Thale cress	cytosol	58.47	61.61
CDX88400	Canola	cytosol	58.47	61.61
CDX87493	Canola	cytosol	58.47	61.61
KRH20440	Soybean	cytosol, mitochondrion	37.29	57.89
CDY14643	Canola	cytosol	53.39	56.25
Zm00001d038535_P001	Maize	cytosol	62.71	52.11
GSMUA_Achr11P...	Banana	plastid	61.02	49.66

Protein Annotations

MapMan:17.1.2.1.31	Gene3D:3.30.1330.30	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR029064	InterPro:L30e-like
PFAM:PF01248	ScanProsite:PS00709	ScanProsite:PS00993	PANTHER:PTHR11449	PANTHER:PTHR11449:SF9	InterPro:Ribosomal_L30e
InterPro:Ribosomal_L30e_CS	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	SUPFAM:SSF55315	EnsemblPlantsGene:TraesCS7D01G480000	EnsemblPlants:TraesCS7D01G480000.2	:

Description

No Description!

Coordinates

chr7D:+:591005406..591007044

Molecular Weight (calculated)

13059.1 Da

IEP (calculated)

9.685

GRAVY (calculated)

0.013

Length

118 amino acids

Sequence
(BLAST)

001: MKSGKYTLGY KTVLKTLRSS KGKLIILANN CPPLRKSEIE YYAMLSKISV HHFHGNNVDL GTACGKYYRV CCLSILDPGS SLLNSKLFAH LSFAGVTCTE
101: RLLRMFPGDS DIITTVPQ

Best Arabidopsis Sequence Match ( AT1G77940.1 )
(BLAST)

001: MVTEKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRG SKGKLILIST NCPPLRRSEI EYYAMLAKVG VHHYNGNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSIPG DQ

Arabidopsis Description

RPL30B60S ribosomal protein L30-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.