Factsheet for Os01t0812800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0490100-01	Rice	cytosol, nucleus	83.04	83.04
VIT_13s0064g00850.t01	Wine grape	cytosol	80.36	80.36
Solyc11g071490.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus	79.46	79.46
PGSC0003DMT400048132	Potato	cytosol	79.46	79.46
KRH01502	Soybean	cytosol, endoplasmic reticulum, nucleus	79.46	79.46
KRH45193	Soybean	cytosol	78.57	78.57
KRH31640	Soybean	cytosol, nucleus	78.57	78.57
KRH69076	Soybean	nucleus	75.0	78.5
Os01t0276000-01	Rice	cytosol, nucleus	77.68	78.38
Solyc01g009100.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	77.68	77.68
GSMUA_AchrUn_...	Banana	cytosol	76.79	76.79
GSMUA_Achr8P09330_001	Banana	cytosol	75.89	75.89
CDY65281	Canola	cytosol	74.11	74.11
CDY18539	Canola	cytosol	74.11	74.11
CDX99322	Canola	cytosol	74.11	74.11
CDX92266	Canola	cytosol	74.11	74.11
Bra001719.1-P	Field mustard	cytosol	74.11	74.11
CDX82330	Canola	cytosol	74.11	74.11
Bra022351.1-P	Field mustard	cytosol	74.11	74.11
Bra037566.1-P	Field mustard	cytosol	74.11	74.11
CDX75983	Canola	cytosol	74.11	74.11
Solyc04g072660.2.1	Tomato	nucleus	74.11	73.45
PGSC0003DMT400070814	Potato	cytosol	74.11	73.45
AT1G77940.1	Thale cress	cytosol	73.21	73.21
Bra003662.1-P	Field mustard	cytosol	73.21	73.21
CDX68035	Canola	extracellular	73.21	73.21
CDX79241	Canola	cytosol	73.21	73.21
CDX87493	Canola	cytosol	73.21	73.21
CDX88400	Canola	cytosol	73.21	73.21
AT1G36240.1	Thale cress	cytosol	73.21	73.21
AT3G18740.1	Thale cress	cytosol	72.32	72.32
KRH20440	Soybean	cytosol, mitochondrion	44.64	65.79
CDY14643	Canola	cytosol	64.29	64.29
GSMUA_Achr11P...	Banana	plastid	73.21	56.55

Protein Annotations

MapMan:17.1.2.1.31	Gene3D:3.30.1330.30	EntrezGene:4327587	EMBL:AK062929	ProteinID:BAD68213.1	ProteinID:BAF06509.1
ProteinID:BAS74886.1	ProteinID:EEE55564.1	GO:GO:0002181	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	InterPro:IPR029064	InterPro:L30e-like
HAMAP:MF_00481	EnsemblPlantsGene:Os01g0812800	EnsemblPlants:Os01t0812800-01	PFAM:PF01248	ScanProsite:PS00709	ScanProsite:PS00993
PANTHER:PTHR11449	PANTHER:PTHR11449:SF6	UniProt:Q5VQR3	InterPro:Ribosomal_L30e	InterPro:Ribosomal_L30e_CS	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45
SUPFAM:SSF55315	UniParc:UPI0000457DCD	RefSeq:XP_015633083.1	:	:	:

Description

Ribosomal protein L30e domain containing protein. (Os01t0812800-01)

Coordinates

chr1:-:34550416..34552611

Molecular Weight (calculated)

12398.2 Da

IEP (calculated)

10.000

GRAVY (calculated)

-0.374

Length

112 amino acids

Sequence
(BLAST)

001: MAPVKKTKKN AEGINNKLQL VMKSGKYTLG YKTVLKTLRN SKGKLVIVAN NCPPLRKSEI EYYAMLGKVS VYHFNGNNVD LGTACGKYYR VCCLSVVDPG
101: DSDITKQLPE SH

Best Arabidopsis Sequence Match ( AT1G36240.1 )
(BLAST)

001: MVAAKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRS SKGKLILISS NCPPLRRSEI EYYAMLAKVG VHHYNRNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSLPG DQ

Arabidopsis Description

RPL30APutative 60S ribosomal protein L30-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8F7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.