Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014749_P001 | Maize | plastid | 100.0 | 100.0 |
| EER90362 | Sorghum | cytosol | 99.11 | 99.11 |
| Os01t0276000-01 | Rice | cytosol, nucleus | 97.32 | 98.2 |
| EES18421 | Sorghum | cytosol | 87.5 | 87.5 |
| TraesCS3D01G191800.1 | Wheat | cytosol | 87.5 | 86.73 |
| TraesCS3B01G217500.1 | Wheat | cytosol | 87.5 | 86.73 |
| TraesCS3A01G187900.1 | Wheat | golgi, nucleus, unclear | 87.5 | 86.73 |
| KRH01502 | Soybean | cytosol, endoplasmic reticulum, nucleus | 85.71 | 85.71 |
| Solyc11g071490.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, nucleus | 84.82 | 84.82 |
| PGSC0003DMT400048132 | Potato | cytosol | 84.82 | 84.82 |
| KRH45193 | Soybean | cytosol | 84.82 | 84.82 |
| KRH31640 | Soybean | cytosol, nucleus | 84.82 | 84.82 |
| GSMUA_AchrUn_... | Banana | cytosol | 84.82 | 84.82 |
| Solyc01g009100.2.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 83.93 | 83.93 |
| GSMUA_Achr8P09330_001 | Banana | cytosol | 83.93 | 83.93 |
| KRH69076 | Soybean | nucleus | 77.68 | 81.31 |
| VIT_13s0064g00850.t01 | Wine grape | cytosol | 80.36 | 80.36 |
| Bra022351.1-P | Field mustard | cytosol | 78.57 | 78.57 |
| Bra001719.1-P | Field mustard | cytosol | 78.57 | 78.57 |
| CDY65281 | Canola | cytosol | 78.57 | 78.57 |
| CDY18539 | Canola | cytosol | 78.57 | 78.57 |
| Bra037566.1-P | Field mustard | cytosol | 78.57 | 78.57 |
| CDX99322 | Canola | cytosol | 78.57 | 78.57 |
| CDX92266 | Canola | cytosol | 78.57 | 78.57 |
| CDX75983 | Canola | cytosol | 78.57 | 78.57 |
| CDX82330 | Canola | cytosol | 78.57 | 78.57 |
| AT1G36240.1 | Thale cress | cytosol | 77.68 | 77.68 |
| Bra003662.1-P | Field mustard | cytosol | 77.68 | 77.68 |
| CDX88400 | Canola | cytosol | 77.68 | 77.68 |
| CDX68035 | Canola | extracellular | 77.68 | 77.68 |
| CDX87493 | Canola | cytosol | 77.68 | 77.68 |
| CDX79241 | Canola | cytosol | 77.68 | 77.68 |
| AT1G77940.1 | Thale cress | cytosol | 76.79 | 76.79 |
| AT3G18740.1 | Thale cress | cytosol | 76.79 | 76.79 |
| KRH20440 | Soybean | cytosol, mitochondrion | 51.79 | 76.32 |
| Solyc04g072660.2.1 | Tomato | nucleus | 76.79 | 76.11 |
| PGSC0003DMT400070814 | Potato | cytosol | 76.79 | 76.11 |
| CDY14643 | Canola | cytosol | 68.75 | 68.75 |
| GSMUA_Achr11P... | Banana | plastid | 82.14 | 63.45 |
Protein Annotations
| MapMan:17.1.2.1.31 | Gene3D:3.30.1330.30 | EntrezGene:8064974 | UniProt:C5Z9E0 | EnsemblPlants:EER90361 | ProteinID:EER90361 |
| ProteinID:EER90361.1 | GO:GO:0002181 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022625 | InterPro:IPR029064 | InterPro:L30e-like | HAMAP:MF_00481 |
| PFAM:PF01248 | ScanProsite:PS00709 | ScanProsite:PS00993 | PANTHER:PTHR11449 | PANTHER:PTHR11449:SF6 | InterPro:Ribosomal_L30e |
| InterPro:Ribosomal_L30e_CS | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 | EnsemblPlantsGene:SORBI_3010G259900 | SUPFAM:SSF55315 | UniParc:UPI0001A4C694 | RefSeq:XP_002438994.1 |
Description
hypothetical protein
Coordinates
chr10:-:59669184..59672829
Molecular Weight (calculated)
12461.3 Da
IEP (calculated)
10.137
GRAVY (calculated)
-0.296
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAAKKTKKS TDNINNKLQL VMKSGKYTLG YKTVLRTLRN SKSKLVIIAN NCPPLRKSEI EYYAMLAKVT VHHFHGNNVD LGTACGKYFR VCCLSIIDPG
101: DSDIIKTTPG EQ
101: DSDIIKTTPG EQ
001: MVAAKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRS SKGKLILISS NCPPLRRSEI EYYAMLAKVG VHHYNRNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSLPG DQ
101: DSDIIKSLPG DQ
Arabidopsis Description
RPL30APutative 60S ribosomal protein L30-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8F7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.