Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plasma membrane 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 48.05 | 44.58 |
| TraesCS3B01G217500.1 | Wheat | cytosol | 61.04 | 41.59 |
| Solyc01g009100.2.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 55.84 | 38.39 |
| PGSC0003DMT400048132 | Potato | cytosol | 54.55 | 37.5 |
| Solyc11g071490.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, nucleus | 54.55 | 37.5 |
| TraesCS7B01G399800.1 | Wheat | cytosol, golgi, plastid, unclear | 51.95 | 36.36 |
| TraesCS1B01G318200.1 | Wheat | cytosol | 51.95 | 35.71 |
| GSMUA_Achr11P... | Banana | extracellular | 10.39 | 8.99 |
Protein Annotations
| Gene3D:3.30.1330.30 | MapMan:35.2 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR029064 | InterPro:L30e-like |
| ScanProsite:PS00993 | PANTHER:PTHR11449 | PANTHER:PTHR11449:SF6 | InterPro:Ribosomal_L30e | InterPro:Ribosomal_L30e_CS | SUPFAM:SSF55315 |
| EnsemblPlantsGene:TraesCS4B01G163300 | EnsemblPlants:TraesCS4B01G163300.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:333370978..333374059
Molecular Weight (calculated)
8466.2 Da
IEP (calculated)
6.476
GRAVY (calculated)
0.175
Length
77 amino acids
Sequence
(BLAST)
(BLAST)
1: MVSFRRSPGS EHGFWIRMIL YLDYKQLTSS LVILANNCPA LHNVDMGTAC GKYFQVCCLS IIDPGDSDII NATPAGQ
001: MVAAKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRS SKGKLILISS NCPPLRRSEI EYYAMLAKVG VHHYNRNNVD LGTACGKYFR VSCLSIVDPG
101: DSDIIKSLPG DQ
101: DSDIIKSLPG DQ
Arabidopsis Description
RPL30APutative 60S ribosomal protein L30-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8F7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.