Subcellular Localization
min:
: max
Winner_takes_all: vacuole, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 70.42 | 34.97 |
| GSMUA_Achr3P22970_001 | Banana | nucleus | 61.27 | 33.33 |
| GSMUA_Achr8P33100_001 | Banana | nucleus | 61.27 | 32.22 |
| GSMUA_Achr4P23830_001 | Banana | cytosol | 54.23 | 28.52 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 7.75 | 7.14 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P14630_001 | EnsemblPlants:GSMUA_Achr11T14630_001 | EnsemblPlantsGene:GSMUA_Achr11G14630_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | InterPro:VAP | PANTHER:PTHR10809 |
| PANTHER:PTHR10809:SF48 | SEG:seg | UniParc:UPI0002951423 | UniProt:M0RS93 | MapMan:35.1 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G14630_001]
Coordinates
chr11:-:16047819..16048965
Molecular Weight (calculated)
16703.3 Da
IEP (calculated)
7.768
GRAVY (calculated)
-0.373
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGYVEIKKK KSIHVYFLYF HFLSHRCIEH RTVCPSKSSF CFRILLSIYC CYIPVQQFDE QKDQVAVEQI LRVVFLDPDH PCPQMEKLKR QLAEAEAALE
101: ARKKPPEDTS PRIVGGLVID EWKERRERYL AQQQQVEGVD SV
101: ARKKPPEDTS PRIVGGLVID EWKERRERYL AQQQQVEGVD SV
001: MPIGDRQNPS VEKKKNLFRL CPFWQRRSTT SSSSTQNPNQ NYRSRHGNRN TDISAVSKPP LTMSSVARSL LPARRRLRLD PSSYLYFPYE PGKQVRSAIK
101: LKNTSKSHTA FKFQTTAPKS CYMRPPGGVL APGESVFATV FKFVEHPENN EKQPLNQKSK VKFKIMSLKV KPGVEYVPEL FDEQKDQVAV EQVLRVIFID
201: ADRPSAALEK LKRQLDEAEA AVEARKKPPP ETGPRVVGEG LVIDEWKERR EKYLARQQVE SVDSLS
101: LKNTSKSHTA FKFQTTAPKS CYMRPPGGVL APGESVFATV FKFVEHPENN EKQPLNQKSK VKFKIMSLKV KPGVEYVPEL FDEQKDQVAV EQVLRVIFID
201: ADRPSAALEK LKRQLDEAEA AVEARKKPPP ETGPRVVGEG LVIDEWKERR EKYLARQQVE SVDSLS
Arabidopsis Description
PVA41Vesicle-associated protein 4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q1ECE0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.