Factsheet for GSMUA_Achr11P14750_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus, plastid, vacuole	34.97	70.42
GSMUA_Achr3P22970_001	Banana	nucleus	58.39	63.98
Zm00001d049598_P001	Maize	plastid	46.85	58.77
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	31.47	58.44
GSMUA_Achr8P33100_001	Banana	nucleus	54.9	58.15
Zm00001d024661_P001	Maize	cytosol	46.5	58.08
TraesCS7B01G207000.2	Wheat	cytosol	45.45	56.77
EES13332	Sorghum	plastid	46.5	56.6
TraesCS7A01G306700.2	Wheat	cytosol	45.1	56.33
Os08t0141300-01	Rice	plasma membrane	45.8	56.22
HORVU7Hr1G073060.2	Barley	plastid	44.41	55.46
TraesCS7D01G303600.2	Wheat	cytosol	45.45	55.08
VIT_00s0203g00040.t01	Wine grape	nucleus	50.35	54.55
KRH21581	Soybean	plastid	33.92	52.15
KRH49936	Soybean	nucleus	48.25	51.3
PGSC0003DMT400057560	Potato	nucleus	47.55	50.94
Solyc02g079230.2.1	Tomato	nucleus, plastid	47.55	50.94
KRH41939	Soybean	nucleus	47.55	50.75
GSMUA_Achr4P23830_001	Banana	cytosol	47.2	50.0
CDY44751	Canola	nucleus	40.21	47.72
Bra020894.1-P	Field mustard	nucleus	45.45	47.27
KRH10748	Soybean	cytosol	41.61	46.48
CDX79064	Canola	nucleus, plastid	45.8	46.13
CDX76427	Canola	nucleus	45.1	45.74
CDY47093	Canola	nucleus	45.1	45.26
CDY71216	Canola	nucleus, plastid	44.06	44.84
CDX82825	Canola	nucleus, plastid	45.1	44.33
Bra013528.1-P	Field mustard	nucleus, plastid	45.1	44.18
Bra029550.1-P	Field mustard	plastid	43.36	44.13
AT4G05060.1	Thale cress	nucleus, plastid	44.06	43.9
AT4G21450.3	Thale cress	nucleus	44.41	40.45

Protein Annotations

Gene3D:2.60.40.10	MapMan:35.1	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr11G14750_001
EnsemblPlants:GSMUA_Achr11P14750_001	EnsemblPlants:GSMUA_Achr11T14750_001	InterPro:IPR000535	InterPro:IPR013783	InterPro:Ig-like_fold	UniProt:M0RSA5
InterPro:MSP_dom	PFAM:PF00635	PANTHER:PTHR10809	PANTHER:PTHR10809:SF48	InterPro:PapD-like_sf	SUPFAM:SSF49354
TMHMM:TMhelix	UniParc:UPI0002958F99	InterPro:VAP	SEG:seg	:	:

Description

MSP domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G14750_001]

Coordinates

chr11:-:16213126..16217800

Molecular Weight (calculated)

31846.4 Da

IEP (calculated)

9.095

GRAVY (calculated)

-0.183

Length

286 amino acids

Sequence
(BLAST)

001: MALAEVKAGT EGKGWGICRL PFFGGGGGGD GGSSSNSSST FILTHNHHYR SSGQGQTGQV EGGAAAAQAG RRSSGATSVS SVARSLLPTR RRLRLDPPTK
101: LYFPYEPGKQ VRSAVRIKNT SKSHVAFKVC AIFHLILAIT CFLTYFLVVI HSLQLNILYF LYFHFLSHRC IEHRTICPSK SSFCFRILLS IYCCYIPVQQ
201: FDEQKDQVAV EQILRVVFLD PDHPCPQMEK LKRQLAEAEA ALEARKKLPE DTGPRIVGEG LVIDEWKERR ERYLAQQQQV EGVDSV

Best Arabidopsis Sequence Match ( AT4G21450.1 )
(BLAST)

001: MTMTEEKPTS DGKGGWGFFK IPFRNSSGHR NAASSAATSP FPSGASSSST SSHLHNHHQH HHQHHHQHHH QLGYNGPHGD GSGQNQHPTP SPSVSSVAKS
101: FLPTKRRLKL DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTAPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPMDQRSR VKFKIMSLKV
201: KGPMDYVPEL FDEQKDDVSK EQILRVIFLD PERSNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GADSV

Arabidopsis Description

PapD-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJI7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.