Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH49936 | Soybean | nucleus | 95.15 | 94.8 |
| KRH21581 | Soybean | plastid | 55.97 | 80.65 |
| VIT_00s0203g00040.t01 | Wine grape | nucleus | 74.25 | 75.38 |
| KRH10748 | Soybean | cytosol | 70.52 | 73.83 |
| PGSC0003DMT400057560 | Potato | nucleus | 71.64 | 71.91 |
| Solyc02g079230.2.1 | Tomato | nucleus, plastid | 71.64 | 71.91 |
| HORVU7Hr1G073060.2 | Barley | plastid | 60.82 | 71.18 |
| Zm00001d049598_P001 | Maize | plastid | 60.45 | 71.05 |
| TraesCS7B01G207000.2 | Wheat | cytosol | 60.45 | 70.74 |
| Zm00001d024661_P001 | Maize | cytosol | 60.07 | 70.31 |
| TraesCS7A01G306700.2 | Wheat | cytosol | 60.07 | 70.31 |
| EES13332 | Sorghum | plastid | 60.82 | 69.36 |
| Os08t0141300-01 | Rice | plasma membrane | 60.07 | 69.1 |
| KRH22167 | Soybean | plastid | 61.57 | 68.75 |
| TraesCS7D01G303600.2 | Wheat | cytosol | 60.45 | 68.64 |
| Bra020894.1-P | Field mustard | nucleus | 68.66 | 66.91 |
| KRH56041 | Soybean | nucleus, plastid | 67.16 | 66.42 |
| KRH27165 | Soybean | plastid | 58.96 | 66.39 |
| CDX79064 | Canola | nucleus, plastid | 70.15 | 66.2 |
| KRH26895 | Soybean | nucleus | 64.93 | 66.16 |
| CDX76427 | Canola | nucleus | 69.4 | 65.96 |
| CDY47093 | Canola | nucleus | 69.78 | 65.61 |
| Bra013528.1-P | Field mustard | nucleus, plastid | 70.9 | 65.07 |
| CDX82825 | Canola | nucleus, plastid | 70.52 | 64.95 |
| KRH22454 | Soybean | nucleus | 64.18 | 64.91 |
| GSMUA_Achr3P22970_001 | Banana | nucleus | 62.69 | 64.37 |
| CDY44751 | Canola | nucleus | 57.84 | 64.32 |
| KRH25486 | Soybean | nucleus, plastid | 56.34 | 64.26 |
| GSMUA_Achr4P23830_001 | Banana | cytosol | 64.55 | 64.07 |
| GSMUA_Achr8P33100_001 | Banana | nucleus | 64.18 | 63.7 |
| TraesCS2D01G210100.1 | Wheat | cytosol | 63.43 | 62.5 |
| TraesCS2A01G206000.1 | Wheat | nucleus | 63.43 | 62.5 |
| TraesCS2B01G233200.1 | Wheat | nucleus | 63.43 | 62.5 |
| HORVU2Hr1G041130.3 | Barley | nucleus | 63.43 | 62.27 |
| Zm00001d049833_P001 | Maize | plastid | 35.07 | 60.65 |
| Os07t0558800-01 | Rice | plasma membrane | 64.18 | 60.56 |
| CDY71216 | Canola | nucleus, plastid | 63.43 | 60.5 |
| AT4G05060.1 | Thale cress | nucleus, plastid | 64.55 | 60.28 |
| AT4G21450.3 | Thale cress | nucleus | 70.52 | 60.19 |
| Bra029550.1-P | Field mustard | plastid | 62.69 | 59.79 |
| EER97373 | Sorghum | nucleus | 60.82 | 58.84 |
| GSMUA_Achr11P... | Banana | cytosol | 50.75 | 47.55 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 26.87 | 46.75 |
Protein Annotations
| EntrezGene:100801956 | Gene3D:2.60.40.10 | MapMan:35.1 | EMBL:ACUP02004782 | EnsemblPlantsGene:GLYMA_08G059800 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 |
| UniProt:I1KQQ9 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold | EnsemblPlants:KRH41939 | ProteinID:KRH41939 |
| ProteinID:KRH41939.1 | ProteinID:KRH41940.1 | InterPro:MSP_dom | PFAM:PF00635 | PFscan:PS50202 | PANTHER:PTHR10809 |
| PANTHER:PTHR10809:SF48 | InterPro:PapD-like_sf | SUPFAM:SSF49354 | UniParc:UPI00023383CF | InterPro:VAP | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:-:4600805..4607850
Molecular Weight (calculated)
30170.0 Da
IEP (calculated)
10.000
GRAVY (calculated)
-0.636
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVADPKPHS EPKVWNFFKL PFRHSATTNT TPSSANLHHL HHHHHNHHHN PNNNLPLEGS TSNTSNSVSS VARSLLPTRR RLKLDPSNKL YFPYEPGKQV
101: RSAIRIKNTS KSNVAFKFQT TAPKSCFMRP PGAILAPGES IIATVFKFVE QPENNEKPEK TGLKFKIMSL KVKGLIDYVP ELFDEQKDQV AVEQILRVVF
201: LDPERPCPAL EKLNRQLADA DAALEARKKP AEDAGPKIIG EGLVIDEWKE RRERYLAKQQ GEVAVDSV
101: RSAIRIKNTS KSNVAFKFQT TAPKSCFMRP PGAILAPGES IIATVFKFVE QPENNEKPEK TGLKFKIMSL KVKGLIDYVP ELFDEQKDQV AVEQILRVVF
201: LDPERPCPAL EKLNRQLADA DAALEARKKP AEDAGPKIIG EGLVIDEWKE RRERYLAKQQ GEVAVDSV
001: MALTEDKSDS DGRRWGKFKL PFRNSNSQAP SASSSSSMAT SSSSVTSSHL NQNYIHQSRH FQYHGPPVVE GLGQNHHQSA ATIPSMSSVA RSLLPTKRRL
101: KLDPSAKLYF PYEPGKQVRS AIKIKNTSKS HVAFKFQTTV PKSCFMRPAG AILAPGEEII ATVFKFVEPP ENNEKPMEQK SGVKFKIMSL KMKVPTDYMP
201: ELFEEQKDHV SEEQVMRVVF LDPENPNSMM EKLKSQLAEA DAADEARKKA SEGIVGPKPI GEGLVIDEWK QRRERYLAQQ QGGVDAA
101: KLDPSAKLYF PYEPGKQVRS AIKIKNTSKS HVAFKFQTTV PKSCFMRPAG AILAPGEEII ATVFKFVEPP ENNEKPMEQK SGVKFKIMSL KMKVPTDYMP
201: ELFEEQKDHV SEEQVMRVVF LDPENPNSMM EKLKSQLAEA DAADEARKKA SEGIVGPKPI GEGLVIDEWK QRRERYLAQQ QGGVDAA
Arabidopsis Description
PVA43Vesicle-associated protein 4-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPQ7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.