Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56041 | Soybean | nucleus, plastid | 95.74 | 83.03 |
| KRH26895 | Soybean | nucleus | 80.0 | 71.48 |
| KRH22454 | Soybean | nucleus | 79.57 | 70.57 |
| VIT_12s0057g00200.t01 | Wine grape | nucleus, plastid | 74.89 | 67.95 |
| KRH22167 | Soybean | plastid | 60.85 | 59.58 |
| KRH27165 | Soybean | plastid | 59.15 | 58.4 |
| PGSC0003DMT400047310 | Potato | plastid | 64.68 | 57.14 |
| KRH21581 | Soybean | plastid | 45.11 | 56.99 |
| KRH49936 | Soybean | nucleus | 65.11 | 56.88 |
| KRH41939 | Soybean | nucleus | 64.26 | 56.34 |
| Solyc07g054740.2.1 | Tomato | plastid | 63.83 | 56.18 |
| KRH10748 | Soybean | cytosol | 57.02 | 52.34 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:35.1 | UniProt:A0A0R0H3L7 | EMBL:ACUP02007264 | EMBL:ACUP02007265 | EnsemblPlantsGene:GLYMA_12G106800 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0016020 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold | EnsemblPlants:KRH25486 | ProteinID:KRH25486 |
| ProteinID:KRH25486.1 | InterPro:MSP_dom | PFAM:PF00635 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF48 | InterPro:PapD-like_sf |
| SUPFAM:SSF49354 | UniParc:UPI0006ED7DAA | InterPro:VAP | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr12:+:9786570..9789673
Molecular Weight (calculated)
26731.9 Da
IEP (calculated)
9.138
GRAVY (calculated)
-0.610
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVESDKTGS VGKGWSFCSM PFWQTTHASS TSSTTTFSMH HSVHHQSQIL QSLDRSTHQP STTVSSVAKS LLPTRRRLRL DPPNKLYFPY EPGKQVRSAI
101: AIKNTCKSHV AFKFVEPPEN NEKPIDQKSR VKFKIMSLKV KGEMDYVPEL FDEQRDHVAV EQILRVIFLD PEHPCPALDK LKRLLAEAEA ALEARKKPPE
201: ETGPRVAGEG LVIDEWKERR ERYLARQQVE VVDSV
101: AIKNTCKSHV AFKFVEPPEN NEKPIDQKSR VKFKIMSLKV KGEMDYVPEL FDEQRDHVAV EQILRVIFLD PEHPCPALDK LKRLLAEAEA ALEARKKPPE
201: ETGPRVAGEG LVIDEWKERR ERYLARQQVE VVDSV
001: MALTEDKSDS DGRRWGKFKL PFRNSNSQAP SASSSSSMAT SSSSVTSSHL NQNYIHQSRH FQYHGPPVVE GLGQNHHQSA ATIPSMSSVA RSLLPTKRRL
101: KLDPSAKLYF PYEPGKQVRS AIKIKNTSKS HVAFKFQTTV PKSCFMRPAG AILAPGEEII ATVFKFVEPP ENNEKPMEQK SGVKFKIMSL KMKVPTDYMP
201: ELFEEQKDHV SEEQVMRVVF LDPENPNSMM EKLKSQLAEA DAADEARKKA SEGIVGPKPI GEGLVIDEWK QRRERYLAQQ QGGVDAA
101: KLDPSAKLYF PYEPGKQVRS AIKIKNTSKS HVAFKFQTTV PKSCFMRPAG AILAPGEEII ATVFKFVEPP ENNEKPMEQK SGVKFKIMSL KMKVPTDYMP
201: ELFEEQKDHV SEEQVMRVVF LDPENPNSMM EKLKSQLAEA DAADEARKKA SEGIVGPKPI GEGLVIDEWK QRRERYLAQQ QGGVDAA
Arabidopsis Description
PVA43Vesicle-associated protein 4-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPQ7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.