Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plasma membrane 3
- plastid 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21581 | Soybean | plastid | 66.41 | 91.4 |
| KRH41939 | Soybean | nucleus | 73.83 | 70.52 |
| KRH49936 | Soybean | nucleus | 73.83 | 70.26 |
| VIT_00s0203g00040.t01 | Wine grape | nucleus | 67.97 | 65.91 |
| HORVU7Hr1G073060.2 | Barley | plastid | 58.59 | 65.5 |
| Zm00001d049598_P001 | Maize | plastid | 58.2 | 65.35 |
| Zm00001d024661_P001 | Maize | cytosol | 58.2 | 65.07 |
| TraesCS7B01G207000.2 | Wheat | cytosol | 57.81 | 64.63 |
| TraesCS7A01G306700.2 | Wheat | cytosol | 57.42 | 64.19 |
| Os08t0141300-01 | Rice | plasma membrane | 58.2 | 63.95 |
| KRH22167 | Soybean | plastid | 59.38 | 63.33 |
| Solyc02g079230.2.1 | Tomato | nucleus, plastid | 65.62 | 62.92 |
| TraesCS7D01G303600.2 | Wheat | cytosol | 57.81 | 62.71 |
| EES13332 | Sorghum | plastid | 57.42 | 62.55 |
| PGSC0003DMT400057560 | Potato | nucleus | 65.23 | 62.55 |
| KRH27165 | Soybean | plastid | 57.81 | 62.18 |
| Bra020894.1-P | Field mustard | nucleus | 66.02 | 61.45 |
| GSMUA_Achr4P23830_001 | Banana | cytosol | 64.06 | 60.74 |
| GSMUA_Achr3P22970_001 | Banana | nucleus | 61.72 | 60.54 |
| CDX76427 | Canola | nucleus | 66.41 | 60.28 |
| CDY44751 | Canola | nucleus | 56.64 | 60.17 |
| KRH26895 | Soybean | nucleus | 61.72 | 60.08 |
| KRH56041 | Soybean | nucleus, plastid | 63.28 | 59.78 |
| CDY47093 | Canola | nucleus | 66.02 | 59.3 |
| CDX79064 | Canola | nucleus, plastid | 65.62 | 59.15 |
| CDX82825 | Canola | nucleus, plastid | 67.19 | 59.11 |
| Bra013528.1-P | Field mustard | nucleus, plastid | 66.8 | 58.56 |
| KRH22454 | Soybean | nucleus | 60.55 | 58.49 |
| GSMUA_Achr8P33100_001 | Banana | nucleus | 61.33 | 58.15 |
| Zm00001d049833_P001 | Maize | plastid | 35.16 | 58.06 |
| HORVU2Hr1G041130.3 | Barley | nucleus | 60.94 | 57.14 |
| KRH25486 | Soybean | nucleus, plastid | 52.34 | 57.02 |
| Os07t0558800-01 | Rice | plasma membrane | 62.89 | 56.69 |
| TraesCS2A01G206000.1 | Wheat | nucleus | 60.16 | 56.62 |
| TraesCS2B01G233200.1 | Wheat | nucleus | 60.16 | 56.62 |
| TraesCS2D01G210100.1 | Wheat | cytosol | 60.16 | 56.62 |
| EER97373 | Sorghum | nucleus | 59.77 | 55.23 |
| CDY71216 | Canola | nucleus, plastid | 60.16 | 54.8 |
| Bra029550.1-P | Field mustard | plastid | 59.38 | 54.09 |
| AT4G05060.1 | Thale cress | nucleus, plastid | 60.55 | 54.01 |
| AT4G21450.3 | Thale cress | nucleus | 66.02 | 53.82 |
| GSMUA_Achr11P... | Banana | cytosol | 46.48 | 41.61 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 22.27 | 37.01 |
Protein Annotations
| EntrezGene:100786563 | Gene3D:2.60.40.10 | MapMan:35.1 | EMBL:ACUP02009157 | ncoils:Coil | EnsemblPlantsGene:GLYMA_15G067100 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0016020 | UniProt:I1ME96 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold | EnsemblPlants:KRH10748 |
| ProteinID:KRH10748 | ProteinID:KRH10748.1 | InterPro:MSP_dom | PFAM:PF00635 | PFscan:PS50202 | PANTHER:PTHR10809 |
| PANTHER:PTHR10809:SF46 | InterPro:PapD-like_sf | SUPFAM:SSF49354 | SignalP:SignalP-noTM | UniParc:UPI00023D2A10 | InterPro:VAP |
Description
hypothetical protein
Coordinates
chr15:+:5110237..5113474
Molecular Weight (calculated)
28880.9 Da
IEP (calculated)
9.698
GRAVY (calculated)
-0.440
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MVILLYLRLE LEVMAIGNEN QPQQSEGKVW NLFKLPFRHS TSTPHNHNQV STSNSVSSFA KSLLPSPRRL KLDPSNKLYF PYEPGKQGRS AIRIKNTSKS
101: NVAFKFQTNA PKSCFMRPPG GILAPGESII ATVFKFIEHP LNNEKPEKTG LKFKITSLKV KGPIDYVPEM FDELKDQVTV EQILQVVFLD PERNCPALEK
201: LKLQLVEADA AVEARKRAPE DAGPKILGEG LVVDEWKERR ERYLAKQQGE VVVDSI
101: NVAFKFQTNA PKSCFMRPPG GILAPGESII ATVFKFIEHP LNNEKPEKTG LKFKITSLKV KGPIDYVPEM FDELKDQVTV EQILQVVFLD PERNCPALEK
201: LKLQLVEADA AVEARKRAPE DAGPKILGEG LVVDEWKERR ERYLAKQQGE VVVDSI
001: MALTEDKSDS DGRRWGKFKL PFRNSNSQAP SASSSSSMAT SSSSVTSSHL NQNYIHQSRH FQYHGPPVVE GLGQNHHQSA ATIPSMSSVA RSLLPTKRRL
101: KLDPSAKLYF PYEPGKQVRS AIKIKNTSKS HVAFKFQTTV PKSCFMRPAG AILAPGEEII ATVFKFVEPP ENNEKPMEQK SGVKFKIMSL KMKVPTDYMP
201: ELFEEQKDHV SEEQVMRVVF LDPENPNSMM EKLKSQLAEA DAADEARKKA SEGIVGPKPI GEGLVIDEWK QRRERYLAQQ QGGVDAA
101: KLDPSAKLYF PYEPGKQVRS AIKIKNTSKS HVAFKFQTTV PKSCFMRPAG AILAPGEEII ATVFKFVEPP ENNEKPMEQK SGVKFKIMSL KMKVPTDYMP
201: ELFEEQKDHV SEEQVMRVVF LDPENPNSMM EKLKSQLAEA DAADEARKKA SEGIVGPKPI GEGLVIDEWK QRRERYLAQQ QGGVDAA
Arabidopsis Description
PVA43Vesicle-associated protein 4-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPQ7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.