Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21581 | Soybean | plastid | 54.92 | 77.96 |
| Zm00001d049598_P001 | Maize | plastid | 66.67 | 77.19 |
| HORVU7Hr1G073060.2 | Barley | plastid | 65.91 | 75.98 |
| Zm00001d024661_P001 | Maize | cytosol | 65.91 | 75.98 |
| KRH49936 | Soybean | nucleus | 77.27 | 75.84 |
| TraesCS7B01G207000.2 | Wheat | cytosol | 65.53 | 75.55 |
| Os08t0141300-01 | Rice | plasma membrane | 66.67 | 75.54 |
| Solyc02g079230.2.1 | Tomato | nucleus, plastid | 76.14 | 75.28 |
| TraesCS7A01G306700.2 | Wheat | cytosol | 65.15 | 75.11 |
| PGSC0003DMT400057560 | Potato | nucleus | 75.76 | 74.91 |
| EES13332 | Sorghum | plastid | 66.67 | 74.89 |
| KRH41939 | Soybean | nucleus | 75.38 | 74.25 |
| VIT_12s0057g00200.t01 | Wine grape | nucleus, plastid | 71.97 | 73.36 |
| TraesCS7D01G303600.2 | Wheat | cytosol | 65.53 | 73.31 |
| GSMUA_Achr3P22970_001 | Banana | nucleus | 68.94 | 69.73 |
| GSMUA_Achr4P23830_001 | Banana | cytosol | 71.21 | 69.63 |
| Bra020894.1-P | Field mustard | nucleus | 71.21 | 68.36 |
| KRH10748 | Soybean | cytosol | 65.91 | 67.97 |
| CDX79064 | Canola | nucleus, plastid | 72.73 | 67.61 |
| GSMUA_Achr8P33100_001 | Banana | nucleus | 68.94 | 67.41 |
| VIT_19s0014g03740.t01 | Wine grape | nucleus, plastid | 67.05 | 67.05 |
| TraesCS2A01G206000.1 | Wheat | nucleus | 68.56 | 66.54 |
| TraesCS2B01G233200.1 | Wheat | nucleus | 68.56 | 66.54 |
| TraesCS2D01G210100.1 | Wheat | cytosol | 68.56 | 66.54 |
| CDX82825 | Canola | nucleus, plastid | 73.11 | 66.32 |
| CDX76427 | Canola | nucleus | 70.83 | 66.31 |
| Bra013528.1-P | Field mustard | nucleus, plastid | 72.73 | 65.75 |
| CDY47093 | Canola | nucleus | 70.83 | 65.61 |
| HORVU2Hr1G041130.3 | Barley | nucleus | 67.8 | 65.57 |
| CDY44751 | Canola | nucleus | 58.71 | 64.32 |
| Os07t0558800-01 | Rice | plasma membrane | 68.94 | 64.08 |
| EER97373 | Sorghum | nucleus | 65.53 | 62.45 |
| AT4G21450.3 | Thale cress | nucleus | 72.73 | 61.15 |
| AT4G05060.1 | Thale cress | nucleus, plastid | 65.53 | 60.28 |
| CDY71216 | Canola | nucleus, plastid | 64.02 | 60.14 |
| Bra029550.1-P | Field mustard | plastid | 63.26 | 59.43 |
| GSMUA_Achr11P... | Banana | cytosol | 54.55 | 50.35 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 25.38 | 43.51 |
Protein Annotations
| EntrezGene:100251685 | wikigene:100251685 | Gene3D:2.60.40.10 | MapMan:35.1 | EMBL:AM459077 | ProteinID:CAN74544 |
| ProteinID:CAN74544.1 | ProteinID:CBI40859 | ProteinID:CBI40859.3 | UniProt:D7UDP4 | EMBL:FN596764 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 |
| InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold | EntrezGene:LOC100251685 | wikigene:LOC100251685 | InterPro:MSP_dom |
| PFAM:PF00635 | PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF48 | InterPro:PapD-like_sf | SUPFAM:SSF49354 |
| TIGR:TC53962 | UniParc:UPI0001BE545F | InterPro:VAP | ArrayExpress:VIT_00s0203g00040 | EnsemblPlantsGene:VIT_00s0203g00040 | EnsemblPlants:VIT_00s0203g00040.t01 |
| unigene:Vvi.11449 | unigene:Vvi.2822 | RefSeq:XP_002275178 | RefSeq:XP_002275178.2 | SEG:seg | : |
Description
No Description!
Coordinates
chrUn:-:11857724..11861745
Molecular Weight (calculated)
29825.8 Da
IEP (calculated)
10.315
GRAVY (calculated)
-0.611
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVPDQRSHS DGKVWGFFKL PFRGNNTITM SSSSTSHSSH LQHHHNQSNM QVEGSNLHPS GSVSSVARSL LPTRRRLRLD PSNKLYFPYE PGKQVRSAIR
101: IKNTSKSHVA FKFQTTAPKS CFMRPPGAIL APGESLIATV FKFVEHPENN EKPMEQKSKV KFKIMSLKVK GPMDYVPEMF DELKDQVAVE QILRVVFLDV
201: ERPSPALDKL KRQLAEAEAA VEARKKPPED AGPRIIGEGL VIDEWKERRE RYLARQQVEG VDSV
101: IKNTSKSHVA FKFQTTAPKS CFMRPPGAIL APGESLIATV FKFVEHPENN EKPMEQKSKV KFKIMSLKVK GPMDYVPEMF DELKDQVAVE QILRVVFLDV
201: ERPSPALDKL KRQLAEAEAA VEARKKPPED AGPRIIGEGL VIDEWKERRE RYLARQQVEG VDSV
001: MTMTEEKPTS DGKGGWGFFK IPFRNSSGHR NAASSAATSP FPSGASSSST SSHLHNHHQH HHQHHHQHHH QLGYNGPHGD GSGQNQHPTP SPSVSSVAKS
101: FLPTKRRLKL DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTAPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPMDQRSR VKFKIMSLKV
201: KGPMDYVPEL FDEQKDDVSK EQILRVIFLD PERSNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GADSV
101: FLPTKRRLKL DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTAPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPMDQRSR VKFKIMSLKV
201: KGPMDYVPEL FDEQKDDVSK EQILRVIFLD PERSNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GADSV
Arabidopsis Description
PapD-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.