Factsheet for TraesCS7D01G303600.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G207000.2	Wheat	cytosol	97.03	100.0
TraesCS7A01G306700.2	Wheat	cytosol	96.19	99.13
HORVU7Hr1G073060.2	Barley	plastid	86.44	89.08
EES13332	Sorghum	plastid	82.63	82.98
Zm00001d024661_P001	Maize	cytosol	80.51	82.97
Zm00001d049598_P001	Maize	plastid	80.08	82.89
Os08t0141300-01	Rice	plasma membrane	80.51	81.55
KRH21581	Soybean	plastid	58.05	73.66
GSMUA_Achr3P22970_001	Banana	nucleus	74.58	67.43
GSMUA_Achr8P33100_001	Banana	nucleus	75.0	65.56
VIT_00s0203g00040.t01	Wine grape	nucleus	73.31	65.53
Solyc02g079230.2.1	Tomato	nucleus, plastid	73.31	64.79
PGSC0003DMT400057560	Potato	nucleus	73.31	64.79
TraesCS2D01G210100.1	Wheat	cytosol	70.76	61.4
KRH49936	Soybean	nucleus	69.07	60.59
KRH41939	Soybean	nucleus	68.64	60.45
Bra020894.1-P	Field mustard	nucleus	69.49	59.64
CDY44751	Canola	nucleus	59.75	58.51
CDX76427	Canola	nucleus	69.49	58.16
CDX79064	Canola	nucleus, plastid	69.92	58.1
KRH10748	Soybean	cytosol	62.71	57.81
CDY47093	Canola	nucleus	69.49	57.54
CDX82825	Canola	nucleus, plastid	70.34	57.04
Bra013528.1-P	Field mustard	nucleus, plastid	70.34	56.85
AT4G21450.3	Thale cress	nucleus	69.07	51.91
CDY71216	Canola	nucleus, plastid	61.44	51.6
Bra029550.1-P	Field mustard	plastid	60.59	50.89
AT4G05060.1	Thale cress	nucleus, plastid	61.44	50.52
GSMUA_Achr11P...	Banana	cytosol	55.08	45.45
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	23.73	36.36

Protein Annotations

Gene3D:2.60.40.10	MapMan:35.1	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0008150	GO:GO:0009719	GO:GO:0009739
GO:GO:0016020	InterPro:IPR000535	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:MSP_dom	PFAM:PF00635
PFscan:PS50202	PANTHER:PTHR10809	PANTHER:PTHR10809:SF48	InterPro:PapD-like_sf	SUPFAM:SSF49354	EnsemblPlantsGene:TraesCS7D01G303600
EnsemblPlants:TraesCS7D01G303600.2	InterPro:VAP	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7D:-:384947289..384949191

Molecular Weight (calculated)

26295.7 Da

IEP (calculated)

9.534

GRAVY (calculated)

-0.461

Length

236 amino acids

Sequence
(BLAST)

001: MPLWGTASGP PPPLAEGGGA EGSGGSSGAA AIRSLLPTRR RLRLDPPSKL YFPYEPGKQV RSAVRIKNVS KSHVAFKFQT TAPKSCFMRP PGGILAPGET
101: IIATVFKFVE HPENNEKPLD QKCKVKFKIV SLKVKGPVEY VPELFYLYMS QFDEQKDQVA VEQILRVIFL DAERPSAQLD RLKRQLAEAE AALEARKKPP
201: EDTSPPIVGE GLVIDEWKER RERYLARQQV EEVDSV

Best Arabidopsis Sequence Match ( AT5G54110.1 )
(BLAST)

001: MPIGDRQNPS VEKKKNLFRL CPFWQRRSTT SSSSTQNPNQ NYRSRHGNRN TDISAVSKPP LTMSSVARSL LPARRRLRLD PSSYLYFPYE PGKQVRSAIK
101: LKNTSKSHTA FKFQTTAPKS CYMRPPGGVL APGESVFATV FKFVEHPENN EKQPLNQKSK VKFKIMSLKV KPGVEYVPEL FDEQKDQVAV EQVLRVIFID
201: ADRPSAALEK LKRQLDEAEA AVEARKKPPP ETGPRVVGEG LVIDEWKERR EKYLARQQVE SVDSLS

Arabidopsis Description

PVA41Vesicle-associated protein 4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q1ECE0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.