Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76427 | Canola | nucleus | 97.89 | 98.94 |
| Bra020894.1-P | Field mustard | nucleus | 95.44 | 98.91 |
| CDX79064 | Canola | nucleus, plastid | 89.47 | 89.79 |
| CDX82825 | Canola | nucleus, plastid | 90.18 | 88.32 |
| AT4G21450.3 | Thale cress | nucleus | 88.07 | 79.94 |
| KRH21581 | Soybean | plastid | 48.42 | 74.19 |
| Solyc02g079230.2.1 | Tomato | nucleus, plastid | 68.42 | 73.03 |
| PGSC0003DMT400057560 | Potato | nucleus | 67.72 | 72.28 |
| TraesCS7A01G306700.2 | Wheat | cytosol | 57.89 | 72.05 |
| TraesCS7B01G207000.2 | Wheat | cytosol | 57.54 | 71.62 |
| KRH49936 | Soybean | nucleus | 67.02 | 71.0 |
| VIT_00s0203g00040.t01 | Wine grape | nucleus | 65.61 | 70.83 |
| HORVU7Hr1G073060.2 | Barley | plastid | 56.49 | 70.31 |
| Zm00001d049598_P001 | Maize | plastid | 56.14 | 70.18 |
| Os08t0141300-01 | Rice | plasma membrane | 57.19 | 69.96 |
| KRH41939 | Soybean | nucleus | 65.61 | 69.78 |
| CDY44751 | Canola | nucleus | 58.95 | 69.71 |
| TraesCS7D01G303600.2 | Wheat | cytosol | 57.54 | 69.49 |
| Zm00001d024661_P001 | Maize | cytosol | 55.79 | 69.43 |
| EES13332 | Sorghum | plastid | 56.84 | 68.94 |
| GSMUA_Achr3P22970_001 | Banana | nucleus | 61.4 | 67.05 |
| GSMUA_Achr4P23830_001 | Banana | cytosol | 63.16 | 66.67 |
| CDY71216 | Canola | nucleus, plastid | 65.26 | 66.19 |
| KRH10748 | Soybean | cytosol | 59.3 | 66.02 |
| GSMUA_Achr8P33100_001 | Banana | nucleus | 62.11 | 65.56 |
| HORVU2Hr1G041130.3 | Barley | nucleus | 61.75 | 64.47 |
| TraesCS2B01G233200.1 | Wheat | nucleus | 61.4 | 64.34 |
| TraesCS2A01G206000.1 | Wheat | nucleus | 61.05 | 63.97 |
| Os07t0558800-01 | Rice | plasma membrane | 63.51 | 63.73 |
| TraesCS2D01G210100.1 | Wheat | cytosol | 60.7 | 63.6 |
| CDY46787 | Canola | cytosol | 53.33 | 63.07 |
| EER97373 | Sorghum | nucleus | 60.7 | 62.45 |
| Zm00001d049833_P001 | Maize | plastid | 33.68 | 61.94 |
| CDY28793 | Canola | plastid | 56.14 | 60.61 |
| CDY41776 | Canola | plastid | 55.44 | 60.08 |
| GSMUA_Achr11P... | Banana | cytosol | 45.26 | 45.1 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 23.86 | 44.16 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:35.1 | GO:A0A078ID19 | UniProt:A0A078ID19 | EnsemblPlants:CDY47093 | ProteinID:CDY47093 |
| ProteinID:CDY47093.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0016020 | EnsemblPlantsGene:GSBRNA2T00086717001 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold |
| InterPro:MSP_dom | PFAM:PF00635 | PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF48 | InterPro:PapD-like_sf |
| SUPFAM:SSF49354 | UniParc:UPI0004EEFED1 | InterPro:VAP | SEG:seg | : | : |
Description
BnaC03g64150DBnaC03g64150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ID19]
Coordinates
chrLK032697:-:31918..34354
Molecular Weight (calculated)
31705.6 Da
IEP (calculated)
9.851
GRAVY (calculated)
-0.784
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMTTEEKPA SDGRGWGIFK IPFRNSHGNA SSAATSPFPS GASSSSSASS HLHNHHHHHH HHGFNGPHGD GSGQNQHPTP SPSVSSVAKS LLPVKRRLKL
101: DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTEPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPVDQRSR VKFKIMSLKV KGPMDYVPEL
201: FDEQKEDVSK EQILRVIFLD PERPNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GVDSV
101: DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTEPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPVDQRSR VKFKIMSLKV KGPMDYVPEL
201: FDEQKEDVSK EQILRVIFLD PERPNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GVDSV
001: MTMTEEKPTS DGKGGWGFFK IPFRNSSGHR NAASSAATSP FPSGASSSST SSHLHNHHQH HHQHHHQHHH QLGYNGPHGD GSGQNQHPTP SPSVSSVAKS
101: FLPTKRRLKL DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTAPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPMDQRSR VKFKIMSLKV
201: KGPMDYVPEL FDEQKDDVSK EQILRVIFLD PERSNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GADSV
101: FLPTKRRLKL DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTAPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPMDQRSR VKFKIMSLKV
201: KGPMDYVPEL FDEQKDDVSK EQILRVIFLD PERSNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GADSV
Arabidopsis Description
PapD-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.