CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10748	Soybean	cytosol	91.4	66.41
TraesCS7B01G207000.2	Wheat	cytosol	73.66	59.83
HORVU7Hr1G073060.2	Barley	plastid	73.12	59.39
TraesCS7A01G306700.2	Wheat	cytosol	73.12	59.39
Zm00001d049598_P001	Maize	plastid	72.58	59.21
Zm00001d024661_P001	Maize	cytosol	72.58	58.95
Os08t0141300-01	Rice	plasma membrane	73.66	58.8
TraesCS7D01G303600.2	Wheat	cytosol	73.66	58.05
EES13332	Sorghum	plastid	72.04	57.02
KRH41939	Soybean	nucleus	80.65	55.97
KRH49936	Soybean	nucleus	80.11	55.39
VIT_00s0203g00040.t01	Wine grape	nucleus	77.96	54.92
KRH27165	Soybean	plastid	69.89	54.62
KRH22167	Soybean	plastid	70.43	54.58
GSMUA_Achr3P22970_001	Banana	nucleus	74.19	52.87
CDY44751	Canola	nucleus	67.74	52.28
GSMUA_Achr8P33100_001	Banana	nucleus	75.81	52.22
Solyc02g079230.2.1	Tomato	nucleus, plastid	74.19	51.69
PGSC0003DMT400057560	Potato	nucleus	74.19	51.69
Bra020894.1-P	Field mustard	nucleus	74.19	50.18
KRH56041	Soybean	nucleus, plastid	72.04	49.45
GSMUA_Achr4P23830_001	Banana	cytosol	71.51	49.26
KRH26895	Soybean	nucleus	69.35	49.05
CDX79064	Canola	nucleus, plastid	74.73	48.94
CDX76427	Canola	nucleus	74.19	48.94
TraesCS2A01G206000.1	Wheat	nucleus	70.97	48.53
TraesCS2B01G233200.1	Wheat	nucleus	70.97	48.53
TraesCS2D01G210100.1	Wheat	cytosol	70.97	48.53
CDY47093	Canola	nucleus	74.19	48.42
HORVU2Hr1G041130.3	Barley	nucleus	70.97	48.35
CDX82825	Canola	nucleus, plastid	75.27	48.11
Bra013528.1-P	Field mustard	nucleus, plastid	75.27	47.95
KRH22454	Soybean	nucleus	68.28	47.92
Zm00001d049833_P001	Maize	plastid	39.78	47.74
Os07t0558800-01	Rice	plasma membrane	71.51	46.83
EER97373	Sorghum	nucleus	69.35	46.57
CDY71216	Canola	nucleus, plastid	68.28	45.2
KRH25486	Soybean	nucleus, plastid	56.99	45.11
Bra029550.1-P	Field mustard	plastid	67.74	44.84
AT4G05060.1	Thale cress	nucleus, plastid	68.82	44.6
AT4G21450.3	Thale cress	nucleus	75.27	44.59
GSMUA_Achr11P...	Banana	cytosol	52.15	33.92
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	16.67	20.13

Protein Annotations

Gene3D:2.60.40.10	MapMan:35.1	UniProt:A0A0R0GTI5	EMBL:ACUP02008360	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G246800
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789
GO:GO:0016020	InterPro:IPR000535	InterPro:IPR013783	InterPro:Ig-like_fold	EnsemblPlants:KRH21581	ProteinID:KRH21581
ProteinID:KRH21581.1	InterPro:MSP_dom	PFAM:PF00635	PFscan:PS50202	PANTHER:PTHR10809	PANTHER:PTHR10809:SF46
InterPro:PapD-like_sf	SUPFAM:SSF49354	UniParc:UPI0006ED9064	InterPro:VAP	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:-:35551954..35553703

Molecular Weight (calculated)

20628.1 Da

IEP (calculated)

8.836

GRAVY (calculated)

-0.294

Length

186 amino acids

Sequence
(BLAST)

001: MPFGSSFLSC VEPGKQAKSA VRIKNTSKSN VAFKFQTNAP KSCFMRPPGG ILAPGESIIA TVFKFIEHPL NNEKPQKTGV KFKITSLKVK GPIDYVPEMF
101: DELKDQVTVE QILQVVFLDP ERSCPALEKL KLQLAEADAA VVEARKRAPE DAGPKILGEG LVIDEWKERR ERYLAKQQGE VVVDSI

Best Arabidopsis Sequence Match ( AT4G05060.1 )
(BLAST)

001: MALTEDKSDS DGRRWGKFKL PFRNSNSQAP SASSSSSMAT SSSSVTSSHL NQNYIHQSRH FQYHGPPVVE GLGQNHHQSA ATIPSMSSVA RSLLPTKRRL
101: KLDPSAKLYF PYEPGKQVRS AIKIKNTSKS HVAFKFQTTV PKSCFMRPAG AILAPGEEII ATVFKFVEPP ENNEKPMEQK SGVKFKIMSL KMKVPTDYMP
201: ELFEEQKDHV SEEQVMRVVF LDPENPNSMM EKLKSQLAEA DAADEARKKA SEGIVGPKPI GEGLVIDEWK QRRERYLAQQ QGGVDAA

Arabidopsis Description

PVA43Vesicle-associated protein 4-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPQ7]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.