Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26895 | Soybean | nucleus | 93.58 | 94.3 |
| KRH56041 | Soybean | nucleus, plastid | 81.89 | 80.07 |
| KRH25486 | Soybean | nucleus, plastid | 70.57 | 79.57 |
| VIT_12s0057g00200.t01 | Wine grape | nucleus, plastid | 71.32 | 72.97 |
| KRH22167 | Soybean | plastid | 63.02 | 69.58 |
| KRH27165 | Soybean | plastid | 61.51 | 68.49 |
| KRH21581 | Soybean | plastid | 47.92 | 68.28 |
| KRH49936 | Soybean | nucleus | 65.66 | 64.68 |
| KRH41939 | Soybean | nucleus | 64.91 | 64.18 |
| PGSC0003DMT400047310 | Potato | plastid | 63.4 | 63.16 |
| Solyc07g054740.2.1 | Tomato | plastid | 63.02 | 62.55 |
| KRH10748 | Soybean | cytosol | 58.49 | 60.55 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:35.1 | EMBL:ACUP02008411 | EnsemblPlantsGene:GLYMA_13G301300 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | UniProt:I1M3X1 |
| InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold | EnsemblPlants:KRH22454 | ProteinID:KRH22454 | ProteinID:KRH22454.1 |
| ProteinID:KRH22455.1 | InterPro:MSP_dom | PFAM:PF00635 | PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF48 |
| InterPro:PapD-like_sf | SUPFAM:SSF49354 | UniParc:UPI0001BA8AF9 | InterPro:VAP | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr13:-:39889141..39893146
Molecular Weight (calculated)
29999.8 Da
IEP (calculated)
8.599
GRAVY (calculated)
-0.625
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVETEKSGS DGKGWSFCRM PFWQTTHTPS SSTTSMSYMH NVHPQNQNNF QSVDRSSHHS STTVSSMAKS LLPTKRRLHL DPSNKLYFPY EPGKQVRSAI
101: AIKNTCKSHV AFKFQTTAPK SCYMRPPAGI LAPGESIIAT VFKFVEPPEN NEKPIDQKSK VKFNIMSLKV QGEMDYVPEL FDEQRDQVAI EQILRVIFLD
201: PEKPSPVLDK LKRMLAEADA ALEARKKPLE EKGPCVAGEG LVIDEWKERR ERYLAQQQVQ GVDSV
101: AIKNTCKSHV AFKFQTTAPK SCYMRPPAGI LAPGESIIAT VFKFVEPPEN NEKPIDQKSK VKFNIMSLKV QGEMDYVPEL FDEQRDQVAI EQILRVIFLD
201: PEKPSPVLDK LKRMLAEADA ALEARKKPLE EKGPCVAGEG LVIDEWKERR ERYLAQQQVQ GVDSV
001: MTMTEEKPTS DGKGGWGFFK IPFRNSSGHR NAASSAATSP FPSGASSSST SSHLHNHHQH HHQHHHQHHH QLGYNGPHGD GSGQNQHPTP SPSVSSVAKS
101: FLPTKRRLKL DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTAPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPMDQRSR VKFKIMSLKV
201: KGPMDYVPEL FDEQKDDVSK EQILRVIFLD PERSNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GADSV
101: FLPTKRRLKL DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTAPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPMDQRSR VKFKIMSLKV
201: KGPMDYVPEL FDEQKDDVSK EQILRVIFLD PERSNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GADSV
Arabidopsis Description
PapD-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.