Factsheet for HORVU7Hr1G073060.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G207000.2	Wheat	cytosol	89.08	89.08
TraesCS7A01G306700.2	Wheat	cytosol	88.21	88.21
TraesCS7D01G303600.2	Wheat	cytosol	89.08	86.44
Zm00001d049598_P001	Maize	plastid	82.1	82.46
EES13332	Sorghum	plastid	84.28	82.13
Zm00001d024661_P001	Maize	cytosol	82.1	82.1
Os08t0141300-01	Rice	plasma membrane	82.53	81.12
KRH21581	Soybean	plastid	59.39	73.12
GSMUA_Achr3P22970_001	Banana	nucleus	75.55	66.28
VIT_00s0203g00040.t01	Wine grape	nucleus	75.98	65.91
GSMUA_Achr8P33100_001	Banana	nucleus	75.98	64.44
PGSC0003DMT400057560	Potato	nucleus	74.24	63.67
Solyc02g079230.2.1	Tomato	nucleus, plastid	74.24	63.67
HORVU2Hr1G041130.3	Barley	nucleus	72.93	61.17
KRH49936	Soybean	nucleus	71.62	60.97
KRH41939	Soybean	nucleus	71.18	60.82
KRH10748	Soybean	cytosol	65.5	58.59
Bra020894.1-P	Field mustard	nucleus	70.31	58.55
CDY44751	Canola	nucleus	60.7	57.68
CDX76427	Canola	nucleus	70.31	57.09
CDX79064	Canola	nucleus, plastid	70.74	57.04
CDY47093	Canola	nucleus	70.31	56.49
CDX82825	Canola	nucleus, plastid	71.18	56.01
Bra013528.1-P	Field mustard	nucleus, plastid	71.18	55.82
AT4G21450.3	Thale cress	nucleus	69.87	50.96
CDY71216	Canola	nucleus, plastid	62.01	50.53
AT4G05060.1	Thale cress	nucleus, plastid	62.88	50.17
Bra029550.1-P	Field mustard	plastid	61.14	49.82
GSMUA_Achr11P...	Banana	cytosol	55.46	44.41
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	22.71	33.77

Protein Annotations

Gene3D:2.60.40.10	MapMan:35.1	UniProt:A0A287WVF5	ncoils:Coil	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0008150	GO:GO:0009719
GO:GO:0009739	GO:GO:0016020	EnsemblPlantsGene:HORVU7Hr1G073060	EnsemblPlants:HORVU7Hr1G073060.2	InterPro:IPR000535	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:MSP_dom	PFAM:PF00635	PFscan:PS50202	PANTHER:PTHR10809	PANTHER:PTHR10809:SF48
InterPro:PapD-like_sf	SUPFAM:SSF49354	UniParc:UPI000B47C3BF	InterPro:VAP	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:-:411692794..411695109

Molecular Weight (calculated)

24087.1 Da

IEP (calculated)

9.957

GRAVY (calculated)

-0.465

Length

229 amino acids

Sequence
(BLAST)

001: MPLWGTXXXX XXXXXXXXXX XGSGGSSGAA AIRSLLPTRR RLRLDPPSKL YFPYEPGKQV RSAVRIKNVS KSHVAFKFQT TAPKSCFMRP PGGILAPGET
101: IIATVFKFVE HPENNEKPLD QKCKVKFKII SLKVKGPVEY VPELFDEQKD QVAVEQILRV VFLDAERPSA QLDRLKRQLA EAEAALEARK KPPEDNSPPI
201: VGEGLVIDEW KERRERYLAR QQVEEVDSV

Best Arabidopsis Sequence Match ( AT4G21450.1 )
(BLAST)

001: MTMTEEKPTS DGKGGWGFFK IPFRNSSGHR NAASSAATSP FPSGASSSST SSHLHNHHQH HHQHHHQHHH QLGYNGPHGD GSGQNQHPTP SPSVSSVAKS
101: FLPTKRRLKL DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTAPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPMDQRSR VKFKIMSLKV
201: KGPMDYVPEL FDEQKDDVSK EQILRVIFLD PERSNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GADSV

Arabidopsis Description

PapD-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJI7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.