Factsheet for TraesCS7B01G207000.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G306700.2	Wheat	cytosol	99.13	99.13
TraesCS7D01G303600.2	Wheat	cytosol	100.0	97.03
HORVU7Hr1G073060.2	Barley	plastid	89.08	89.08
EES13332	Sorghum	plastid	85.15	82.98
Zm00001d024661_P001	Maize	cytosol	82.97	82.97
Zm00001d049598_P001	Maize	plastid	82.53	82.89
Os08t0141300-01	Rice	plasma membrane	82.97	81.55
KRH21581	Soybean	plastid	59.83	73.66
GSMUA_Achr3P22970_001	Banana	nucleus	76.86	67.43
GSMUA_Achr8P33100_001	Banana	nucleus	77.29	65.56
VIT_00s0203g00040.t01	Wine grape	nucleus	75.55	65.53
Solyc02g079230.2.1	Tomato	nucleus, plastid	75.55	64.79
PGSC0003DMT400057560	Potato	nucleus	75.55	64.79
TraesCS2B01G233200.1	Wheat	nucleus	72.93	61.4
KRH49936	Soybean	nucleus	71.18	60.59
KRH41939	Soybean	nucleus	70.74	60.45
Bra020894.1-P	Field mustard	nucleus	71.62	59.64
CDY44751	Canola	nucleus	61.57	58.51
CDX76427	Canola	nucleus	71.62	58.16
CDX79064	Canola	nucleus, plastid	72.05	58.1
KRH10748	Soybean	cytosol	64.63	57.81
CDY47093	Canola	nucleus	71.62	57.54
CDX82825	Canola	nucleus, plastid	72.49	57.04
Bra013528.1-P	Field mustard	nucleus, plastid	72.49	56.85
AT4G21450.3	Thale cress	nucleus	71.18	51.91
CDY71216	Canola	nucleus, plastid	63.32	51.6
Bra029550.1-P	Field mustard	plastid	62.45	50.89
AT4G05060.1	Thale cress	nucleus, plastid	63.32	50.52
GSMUA_Achr11P...	Banana	cytosol	56.77	45.45
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	24.45	36.36

Protein Annotations

Gene3D:2.60.40.10	MapMan:35.1	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0008150	GO:GO:0009719	GO:GO:0009739
GO:GO:0016020	InterPro:IPR000535	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:MSP_dom	PFAM:PF00635
PFscan:PS50202	PANTHER:PTHR10809	PANTHER:PTHR10809:SF48	InterPro:PapD-like_sf	SUPFAM:SSF49354	EnsemblPlantsGene:TraesCS7B01G207000
EnsemblPlants:TraesCS7B01G207000.2	InterPro:VAP	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7B:-:379429707..379431306

Molecular Weight (calculated)

25362.6 Da

IEP (calculated)

9.627

GRAVY (calculated)

-0.482

Length

229 amino acids

Sequence
(BLAST)

001: MPLWGTASGP PPPLAEGGGA EGSGGSSGAA AIRSLLPTRR RLRLDPPSKL YFPYEPGKQV RSAVRIKNVS KSHVAFKFQT TAPKSCFMRP PGGILAPGET
101: IIATVFKFVE HPENNEKPLD QKCKVKFKIV SLKVKGPVEY VPELFDEQKD QVAVEQILRV IFLDAERPSA QLDRLKRQLA EAEAALEARK KPPEDTSPPI
201: VGEGLVIDEW KERRERYLAR QQVEEVDSV

Best Arabidopsis Sequence Match ( AT4G21450.1 )
(BLAST)

001: MTMTEEKPTS DGKGGWGFFK IPFRNSSGHR NAASSAATSP FPSGASSSST SSHLHNHHQH HHQHHHQHHH QLGYNGPHGD GSGQNQHPTP SPSVSSVAKS
101: FLPTKRRLKL DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTAPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPMDQRSR VKFKIMSLKV
201: KGPMDYVPEL FDEQKDDVSK EQILRVIFLD PERSNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GADSV

Arabidopsis Description

PapD-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJI7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.