Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020894.1-P | Field mustard | nucleus | 96.45 | 98.91 |
| CDY47093 | Canola | nucleus | 98.94 | 97.89 |
| CDX79064 | Canola | nucleus, plastid | 90.43 | 89.79 |
| CDX82825 | Canola | nucleus, plastid | 91.49 | 88.66 |
| AT4G21450.3 | Thale cress | nucleus | 89.36 | 80.25 |
| KRH21581 | Soybean | plastid | 48.94 | 74.19 |
| Solyc02g079230.2.1 | Tomato | nucleus, plastid | 69.5 | 73.41 |
| PGSC0003DMT400057560 | Potato | nucleus | 68.79 | 72.66 |
| TraesCS7A01G306700.2 | Wheat | cytosol | 58.51 | 72.05 |
| TraesCS7B01G207000.2 | Wheat | cytosol | 58.16 | 71.62 |
| KRH49936 | Soybean | nucleus | 68.09 | 71.38 |
| VIT_00s0203g00040.t01 | Wine grape | nucleus | 66.31 | 70.83 |
| HORVU7Hr1G073060.2 | Barley | plastid | 57.09 | 70.31 |
| Zm00001d049598_P001 | Maize | plastid | 56.74 | 70.18 |
| Os08t0141300-01 | Rice | plasma membrane | 57.8 | 69.96 |
| CDY44751 | Canola | nucleus | 59.57 | 69.71 |
| TraesCS7D01G303600.2 | Wheat | cytosol | 58.16 | 69.49 |
| Zm00001d024661_P001 | Maize | cytosol | 56.38 | 69.43 |
| KRH41939 | Soybean | nucleus | 65.96 | 69.4 |
| EES13332 | Sorghum | plastid | 57.45 | 68.94 |
| GSMUA_Achr3P22970_001 | Banana | nucleus | 62.06 | 67.05 |
| GSMUA_Achr4P23830_001 | Banana | cytosol | 64.18 | 67.04 |
| KRH10748 | Soybean | cytosol | 60.28 | 66.41 |
| CDY71216 | Canola | nucleus, plastid | 65.96 | 66.19 |
| GSMUA_Achr8P33100_001 | Banana | nucleus | 62.77 | 65.56 |
| HORVU2Hr1G041130.3 | Barley | nucleus | 62.77 | 64.84 |
| TraesCS2B01G233200.1 | Wheat | nucleus | 62.06 | 64.34 |
| TraesCS2A01G206000.1 | Wheat | nucleus | 61.7 | 63.97 |
| Os07t0558800-01 | Rice | plasma membrane | 64.18 | 63.73 |
| TraesCS2D01G210100.1 | Wheat | cytosol | 61.35 | 63.6 |
| CDY46787 | Canola | cytosol | 53.9 | 63.07 |
| EER97373 | Sorghum | nucleus | 61.7 | 62.82 |
| Zm00001d049833_P001 | Maize | plastid | 34.04 | 61.94 |
| CDY28793 | Canola | plastid | 56.74 | 60.61 |
| CDY41776 | Canola | plastid | 56.03 | 60.08 |
| GSMUA_Achr11P... | Banana | cytosol | 45.74 | 45.1 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 23.76 | 43.51 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:35.1 | GO:A0A078CI36 | EnsemblPlants:CDX76427 | ProteinID:CDX76427 | ProteinID:CDX76427.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0016020 | EnsemblPlantsGene:GSBRNA2T00126833001 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:MSP_dom |
| PFAM:PF00635 | PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF48 | InterPro:PapD-like_sf | SUPFAM:SSF49354 |
| UniParc:UPI0004EF4252 | InterPro:VAP | SEG:seg | : | : | : |
Description
BnaA08g09730D
Coordinates
chrLK031807:+:1134914..1137354
Molecular Weight (calculated)
31459.3 Da
IEP (calculated)
9.807
GRAVY (calculated)
-0.801
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMTTEEKPA SDGRGWGIFK IPFRNSHGNA SSAATSPFPS GASSSSSHLH HHHHPHHHHG YNGPHGDGSG QNQHPTPSPS VSSVAKSLLP VKRRLKLDPS
101: EKLYFPYEPG KQVRSAIKIK NTSKSHVAFK FQTTEPKSCF MRPPGAILAP GETIIATVFK FVEPPENNEK PVDQRSRVKF KIMSLKVKGP MDYVPELFDE
201: QKEDVSKEQI LRVIFLDPER PNPALEKLKR QLAEADAAVE ARKKPPEETG PKMIGEGLVI DEWKERRERY LAQQQGEGVD SV
101: EKLYFPYEPG KQVRSAIKIK NTSKSHVAFK FQTTEPKSCF MRPPGAILAP GETIIATVFK FVEPPENNEK PVDQRSRVKF KIMSLKVKGP MDYVPELFDE
201: QKEDVSKEQI LRVIFLDPER PNPALEKLKR QLAEADAAVE ARKKPPEETG PKMIGEGLVI DEWKERRERY LAQQQGEGVD SV
001: MTMTEEKPTS DGKGGWGFFK IPFRNSSGHR NAASSAATSP FPSGASSSST SSHLHNHHQH HHQHHHQHHH QLGYNGPHGD GSGQNQHPTP SPSVSSVAKS
101: FLPTKRRLKL DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTAPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPMDQRSR VKFKIMSLKV
201: KGPMDYVPEL FDEQKDDVSK EQILRVIFLD PERSNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GADSV
101: FLPTKRRLKL DPSEKLYFPY EPGKQVRSAI KIKNTSKSHV AFKFQTTAPK SCFMRPPGAI LAPGETIIAT VFKFVEPPEN NEKPMDQRSR VKFKIMSLKV
201: KGPMDYVPEL FDEQKDDVSK EQILRVIFLD PERSNPALEK LKRQLAEADA AVEARKKPPE ETGPKMIGEG LVIDEWKERR ERYLAQQQGE GADSV
Arabidopsis Description
PapD-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.