Factsheet for TraesCS2B01G233200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G206000.1	Wheat	nucleus	99.26	99.26
TraesCS2D01G210100.1	Wheat	cytosol	98.53	98.53
HORVU2Hr1G041130.3	Barley	nucleus	92.65	92.31
EER97373	Sorghum	nucleus	85.29	83.75
Os07t0558800-01	Rice	plasma membrane	83.46	79.93
TraesCS7B01G207000.2	Wheat	cytosol	61.4	72.93
KRH21581	Soybean	plastid	48.53	70.97
VIT_00s0203g00040.t01	Wine grape	nucleus	66.54	68.56
Solyc02g079230.2.1	Tomato	nucleus, plastid	65.81	67.04
PGSC0003DMT400057560	Potato	nucleus	65.81	67.04
GSMUA_Achr4P23830_001	Banana	cytosol	66.18	66.67
KRH49936	Soybean	nucleus	63.24	63.94
KRH41939	Soybean	nucleus	62.5	63.43
Bra020894.1-P	Field mustard	nucleus	63.24	62.55
CDX76427	Canola	nucleus	64.34	62.06
CDX79064	Canola	nucleus, plastid	64.34	61.62
CDY47093	Canola	nucleus	64.34	61.4
CDY44751	Canola	nucleus	54.04	61.0
KRH10748	Soybean	cytosol	56.62	60.16
CDX82825	Canola	nucleus, plastid	64.34	60.14
Bra013528.1-P	Field mustard	nucleus, plastid	64.34	59.93
AT4G05060.1	Thale cress	nucleus, plastid	58.46	55.4
CDY71216	Canola	nucleus, plastid	56.62	54.8
AT4G21450.3	Thale cress	nucleus	63.24	54.78
Bra029550.1-P	Field mustard	plastid	55.88	54.09

Protein Annotations

EnsemblPlants:TraesCS2B01G233200.1	EnsemblPlantsGene:TraesCS2B01G233200	Gene3D:2.60.40.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	InterPro:IPR000535	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:MSP_dom	InterPro:PapD-like_sf	InterPro:VAP	PANTHER:PTHR10809	PANTHER:PTHR10809:SF56
PFAM:PF00635	PFscan:PS50202	SEG:seg	SUPFAM:SSF49354	MapMan:35.1	:

Description

No Description!

Coordinates

chr2B:-:231664284..231668613

Molecular Weight (calculated)

29626.5 Da

IEP (calculated)

9.675

GRAVY (calculated)

-0.447

Length

272 amino acids

Sequence
(BLAST)

001: MAISGDDRYA PAADSGGGKL WNLCRMPFRQ ASGAPAPASS SSSSGIHHSA GRYGHEAPVA GDGGTPAAPA GISTVAKSLL PARRRLRLDP SNKLYFPYEP
101: GKQVKSAIRI KNTSKSHVAF KFQTTAPKSC FMRPPGAILA PGETIIATVF KFVEHPENNE NVLQKCKVKF KILSLKVKGP MEYAPELFDE QKDQAVVEKI
201: LRVVFLDVQN PGPQLEKLNT QLAEAEAALE ARKKPPEENG PKIVGEGLVI DEWKERRERY LAQQQVEAVD SV

Best Arabidopsis Sequence Match ( AT4G05060.1 )
(BLAST)

001: MALTEDKSDS DGRRWGKFKL PFRNSNSQAP SASSSSSMAT SSSSVTSSHL NQNYIHQSRH FQYHGPPVVE GLGQNHHQSA ATIPSMSSVA RSLLPTKRRL
101: KLDPSAKLYF PYEPGKQVRS AIKIKNTSKS HVAFKFQTTV PKSCFMRPAG AILAPGEEII ATVFKFVEPP ENNEKPMEQK SGVKFKIMSL KMKVPTDYMP
201: ELFEEQKDHV SEEQVMRVVF LDPENPNSMM EKLKSQLAEA DAADEARKKA SEGIVGPKPI GEGLVIDEWK QRRERYLAQQ QGGVDAA

Arabidopsis Description

PVA43Vesicle-associated protein 4-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPQ7]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.