Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44751 | Canola | nucleus | 66.9 | 79.67 |
| CDY71216 | Canola | nucleus, plastid | 77.0 | 78.65 |
| Bra029550.1-P | Field mustard | plastid | 75.96 | 77.58 |
| KRH21581 | Soybean | plastid | 44.6 | 68.82 |
| PGSC0003DMT400057560 | Potato | nucleus | 62.37 | 67.04 |
| Solyc02g079230.2.1 | Tomato | nucleus, plastid | 62.37 | 67.04 |
| VIT_00s0203g00040.t01 | Wine grape | nucleus | 60.28 | 65.53 |
| Zm00001d049598_P001 | Maize | plastid | 51.92 | 65.35 |
| KRH49936 | Soybean | nucleus | 60.98 | 65.06 |
| Zm00001d024661_P001 | Maize | cytosol | 51.57 | 64.63 |
| KRH41939 | Soybean | nucleus | 60.28 | 64.55 |
| Os08t0141300-01 | Rice | plasma membrane | 51.92 | 63.95 |
| TraesCS7A01G306700.2 | Wheat | cytosol | 50.87 | 63.76 |
| TraesCS7B01G207000.2 | Wheat | cytosol | 50.52 | 63.32 |
| HORVU7Hr1G073060.2 | Barley | plastid | 50.17 | 62.88 |
| EES13332 | Sorghum | plastid | 51.22 | 62.55 |
| GSMUA_Achr3P22970_001 | Banana | nucleus | 56.45 | 62.07 |
| TraesCS7D01G303600.2 | Wheat | cytosol | 50.52 | 61.44 |
| GSMUA_Achr8P33100_001 | Banana | nucleus | 57.14 | 60.74 |
| KRH10748 | Soybean | cytosol | 54.01 | 60.55 |
| Zm00001d049833_P001 | Maize | plastid | 32.4 | 60.0 |
| AT4G21450.3 | Thale cress | nucleus | 65.51 | 59.87 |
| TraesCS2B01G233200.1 | Wheat | nucleus | 55.4 | 58.46 |
| HORVU2Hr1G041130.3 | Barley | nucleus | 55.4 | 58.24 |
| TraesCS2A01G206000.1 | Wheat | nucleus | 55.05 | 58.09 |
| TraesCS2D01G210100.1 | Wheat | cytosol | 54.7 | 57.72 |
| GSMUA_Achr4P23830_001 | Banana | cytosol | 53.66 | 57.04 |
| Os07t0558800-01 | Rice | plasma membrane | 54.7 | 55.28 |
| EER97373 | Sorghum | nucleus | 52.61 | 54.51 |
| AT5G54110.1 | Thale cress | nucleus, plastid | 50.17 | 54.14 |
| GSMUA_Achr11P... | Banana | cytosol | 43.9 | 44.06 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 23.34 | 43.51 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:35.1 | EntrezGene:825848 | ProteinID:AAD48979.1 | ProteinID:AEE82472.1 | EMBL:AK221803 |
| ArrayExpress:AT4G05060 | EnsemblPlantsGene:AT4G05060 | RefSeq:AT4G05060 | TAIR:AT4G05060 | RefSeq:AT4G05060-TAIR-G | EnsemblPlants:AT4G05060.1 |
| TAIR:AT4G05060.1 | EMBL:AY087509 | EMBL:AY094468 | EMBL:AY143842 | ProteinID:CAB81048.1 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0008150 |
| GO:GO:0016020 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:MSP_dom | RefSeq:NP_567287.1 |
| PFAM:PF00635 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF46 | InterPro:PapD-like_sf | UniProt:Q8LPQ7 |
| SUPFAM:SSF49354 | UniParc:UPI00000AC710 | InterPro:VAP | SEG:seg | : | : |
Description
PVA43Vesicle-associated protein 4-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPQ7]
Coordinates
chr4:-:2590065..2592541
Molecular Weight (calculated)
31965.1 Da
IEP (calculated)
9.881
GRAVY (calculated)
-0.666
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTEDKSDS DGRRWGKFKL PFRNSNSQAP SASSSSSMAT SSSSVTSSHL NQNYIHQSRH FQYHGPPVVE GLGQNHHQSA ATIPSMSSVA RSLLPTKRRL
101: KLDPSAKLYF PYEPGKQVRS AIKIKNTSKS HVAFKFQTTV PKSCFMRPAG AILAPGEEII ATVFKFVEPP ENNEKPMEQK SGVKFKIMSL KMKVPTDYMP
201: ELFEEQKDHV SEEQVMRVVF LDPENPNSMM EKLKSQLAEA DAADEARKKA SEGIVGPKPI GEGLVIDEWK QRRERYLAQQ QGGVDAA
101: KLDPSAKLYF PYEPGKQVRS AIKIKNTSKS HVAFKFQTTV PKSCFMRPAG AILAPGEEII ATVFKFVEPP ENNEKPMEQK SGVKFKIMSL KMKVPTDYMP
201: ELFEEQKDHV SEEQVMRVVF LDPENPNSMM EKLKSQLAEA DAADEARKKA SEGIVGPKPI GEGLVIDEWK QRRERYLAQQ QGGVDAA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.