Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_14s0128g00020.t01 | Wine grape | plasma membrane | 65.25 | 65.25 |
| GSMUA_Achr8P21980_001 | Banana | plasma membrane | 59.7 | 59.59 |
| GSMUA_Achr11P... | Banana | plasma membrane | 58.96 | 59.4 |
| GSMUA_Achr3P23840_001 | Banana | plasma membrane | 57.67 | 58.1 |
| GSMUA_Achr5P04100_001 | Banana | plasma membrane | 55.45 | 57.69 |
| GSMUA_Achr8P06790_001 | Banana | plasma membrane | 57.3 | 57.62 |
| GSMUA_Achr10P... | Banana | plasma membrane | 57.12 | 56.91 |
| GSMUA_Achr2P01560_001 | Banana | plasma membrane | 56.56 | 56.88 |
| GSMUA_Achr6P20250_001 | Banana | plasma membrane | 58.23 | 54.97 |
| GSMUA_Achr10P... | Banana | peroxisome, plasma membrane, plastid | 24.4 | 26.19 |
| GSMUA_Achr2P05520_001 | Banana | plasma membrane | 10.72 | 23.48 |
Protein Annotations
| Gene3D:1.20.1530.20 | MapMan:24.2.8.1.1 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006812 | GO:GO:0006814 | GO:GO:0006885 |
| GO:GO:0008150 | GO:GO:0015297 | GO:GO:0015299 | GO:GO:0015385 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0035725 | GO:GO:0055085 | GO:GO:1902600 | EnsemblPlantsGene:GSMUA_Achr2G01860_001 | EnsemblPlants:GSMUA_Achr2P01860_001 | EnsemblPlants:GSMUA_Achr2T01860_001 |
| InterPro:IPR038770 | UniProt:M0S4C7 | InterPro:Na+/solute_symporter_sf | InterPro:NaH_exchanger | PFAM:PF00999 | PRINTS:PR01084 |
| PANTHER:PTHR10110 | PANTHER:PTHR10110:SF107 | TIGRFAMs:TIGR00840 | TMHMM:TMhelix | UniParc:UPI000295F17A | SEG:seg |
Description
Sodium/hydrogen exchanger 2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G01860_001]
Coordinates
chr2:+:7734335..7748970
Molecular Weight (calculated)
59554.0 Da
IEP (calculated)
8.891
GRAVY (calculated)
0.552
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSTLLSLP ASDLPTTVAT ASVVVSITVF VALLCACLVI GHLLEGSRWA NESIASLLLG LCAGLVMLLV TKWKRSRILT FDEELFFIYL LPPIIFNAGF
101: QVKKKQFFRN FSTILLFGVL GTLISFCIIS TGKKCSYFLF KQIGITSLKI QQYLATGAIF SATDSVCTLQ VLNQDETPLL YSLVFGEGVA NDATSIVLFN
201: AVQSLNLSHV KAMTAIKLFG TFLYLFFTST ALGVMIGLLS AYIIKKLYFG RHSTNREVAI MLLLAYLSYM IAELLSLSGI LTIFFCGIIM SHYTWHNVTE
301: RSRITTRHAF AAMSFISETF IFLYVGMDAL DIDKWKRSDA SVGTTVAASG TLFALVMVGR AIFVFSLANF ANFFRHASDA KIDLRQQFVI WWAGLMRGSV
401: TIALSYNQFS TSSSKEGAFM ITNSIVVVLF STVVFGSVTK PLIKAALCHN WTSTNGEDAH LSSLEDINIL FPDNCRTSGN DTSHANPRSS LGMLIMHPTS
501: TIHYLWRRFD DRHMRPLFGG RGFVPLLSSS TLTSSEGADG V
101: QVKKKQFFRN FSTILLFGVL GTLISFCIIS TGKKCSYFLF KQIGITSLKI QQYLATGAIF SATDSVCTLQ VLNQDETPLL YSLVFGEGVA NDATSIVLFN
201: AVQSLNLSHV KAMTAIKLFG TFLYLFFTST ALGVMIGLLS AYIIKKLYFG RHSTNREVAI MLLLAYLSYM IAELLSLSGI LTIFFCGIIM SHYTWHNVTE
301: RSRITTRHAF AAMSFISETF IFLYVGMDAL DIDKWKRSDA SVGTTVAASG TLFALVMVGR AIFVFSLANF ANFFRHASDA KIDLRQQFVI WWAGLMRGSV
401: TIALSYNQFS TSSSKEGAFM ITNSIVVVLF STVVFGSVTK PLIKAALCHN WTSTNGEDAH LSSLEDINIL FPDNCRTSGN DTSHANPRSS LGMLIMHPTS
501: TIHYLWRRFD DRHMRPLFGG RGFVPLLSSS TLTSSEGADG V
001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP
Arabidopsis Description
NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.