Factsheet for GSMUA_Achr5P04100_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 4
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0090g01480.t01	Wine grape	plasma membrane	68.85	68.71
Bra009647.1-P	Field mustard	cytosol	9.23	67.61
HORVU7Hr1G046030.1	Barley	plasma membrane	67.88	66.98
TraesCS7A01G228400.1	Wheat	plasma membrane	67.69	66.79
TraesCS7D01G226200.1	Wheat	plasma membrane	67.5	66.6
TraesCS7B01G191300.1	Wheat	plasma membrane	67.31	66.41
KRH46278	Soybean	plasma membrane	67.12	65.97
KXG19894	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	66.92	65.66
Os06t0318500-00	Rice	plasma membrane	67.88	65.25
Solyc10g006080.1.1	Tomato	plasma membrane	65.77	65.14
Zm00001d045883_P001	Maize	plasma membrane	67.31	64.22
AT5G55470.1	Thale cress	plasma membrane	64.81	63.71
PGSC0003DMT400085382	Potato	plasma membrane	65.96	62.59
Bra002905.1-P	Field mustard	plasma membrane	63.65	62.1
CDY17324	Canola	plasma membrane	63.46	61.91
CDY45655	Canola	plasma membrane	61.35	60.3
GSMUA_Achr11P...	Banana	plasma membrane	59.42	57.54
GSMUA_Achr8P21980_001	Banana	plasma membrane	59.04	56.64
GSMUA_Achr3P23840_001	Banana	plasma membrane	57.5	55.68
GSMUA_Achr8P06790_001	Banana	plasma membrane	57.5	55.58
GSMUA_Achr2P01860_001	Banana	plasma membrane	57.69	55.45
GSMUA_Achr10P...	Banana	plasma membrane	57.88	55.43
GSMUA_Achr2P01560_001	Banana	plasma membrane	56.92	55.02
GSMUA_Achr6P20250_001	Banana	plasma membrane	59.23	53.75
GSMUA_Achr10P...	Banana	peroxisome, plasma membrane, plastid	26.73	27.58
GSMUA_Achr2P05520_001	Banana	plasma membrane	11.54	24.29

Protein Annotations

MapMan:24.2.8.1.1	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886
GO:GO:0006810	GO:GO:0006811	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885	GO:GO:0006950
GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0015297	GO:GO:0015299	GO:GO:0015385
GO:GO:0016020	GO:GO:0016021	GO:GO:0035725	GO:GO:0055075	GO:GO:0055085	GO:GO:1902600
EnsemblPlantsGene:GSMUA_Achr5G04100_001	EnsemblPlants:GSMUA_Achr5P04100_001	EnsemblPlants:GSMUA_Achr5T04100_001	UniProt:M0SVI9	InterPro:NHX4	InterPro:NaH_exchanger
PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF101	TIGRFAMs:TIGR00840	TMHMM:TMhelix
UniParc:UPI00029631B2	SEG:seg	:	:	:	:

Description

Sodium/hydrogen exchanger 4 [Source:GMGC_GENE;Acc:GSMUA_Achr5G04100_001]

Coordinates

chr5:-:2930320..2938952

Molecular Weight (calculated)

57997.4 Da

IEP (calculated)

7.716

GRAVY (calculated)

0.591

Length

520 amino acids

Sequence
(BLAST)

001: MALDLFPLAG MVFDDNAAAA DRGRVVSVSM FVAVLCLCMV VGHLLEESRW TNESITSIVI GCIVGTIILV ASKGKNSHIV RFDQELFFMY LLPPIIFNAG
101: FQVKKKQFFH NFLTILLFGV VGIFISFVII SAGSWKLFPK IGFTGLSIQE YLALGAIFSS TDTVCTLQVL HQDETPRLYS LVFGEGVVND ATSIVLFNTI
201: QKLDVSKLEG WAVLHVFGDF LYLFFTSTIL GIAIGLLTSY ALRALYFGSR HSTDREIALM VLMAYLSYMM AELSQLSGIL TVFFCGIVMS HYAWHNVTEN
301: SRITTRHIFA TMSFIAETFI FLYVGMDALD IEKWKAMKTS LKTCFGIYGV IIFLVLLGRA AFVFPLSILS NYISSHSETS LITLRHQVVI WWAGLMRGAV
401: SIALAFSQFA HSGVTWDPVY ATMITSTMVV VLFSTLVFGF LTKPLINVVL PHHVHHGSDQ QPKTDDITLS LIPPEDSAES GLQQARRSLS RLLARPVHTI
501: HAYWRKFDDK YMRPVFGGPT

Best Arabidopsis Sequence Match ( AT5G55470.1 )
(BLAST)

001: MSIGLTEFVT NKLAAEHPQV IPISVFIAIL CLCLVIGHLL EENRWVNESI TAILVGAASG TVILLISKGK SSHILVFDEE LFFIYLLPPI IFNAGFQVKK
101: KKFFHNFLTI MSFGVIGVFI STVIISFGTW WLFPKLGFKG LSARDYLAIG TIFSSTDTVC TLQILHQDET PLLYSLVFGE GVVNDATSVV LFNAVQKIQF
201: ESLTGWTALQ VFGNFLYLFS TSTLLGIGVG LITSFVLKTL YFGRHSTTRE LAIMVLMAYL SYMLAELFSL SGILTVFFCG VLMSHYASYN VTESSRITSR
301: HVFAMLSFIA ETFIFLYVGT DALDFTKWKT SSLSFGGTLG VSGVITALVL LGRAAFVFPL SVLTNFMNRH TERNESITFK HQVIIWWAGL MRGAVSIALA
401: FKQFTYSGVT LDPVNAAMVT NTTIVVLFTT LVFGFLTKPL VNYLLPQDAS HNTGNRGKRT EPGSPKEDAT LPLLSFDESA STNFNRAKDS ISLLMEQPVY
501: TIHRYWRKFD DTYMRPIFGG PRRENQPEC

Arabidopsis Description

NHX4Sodium/hydrogen exchanger 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8S397]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.