CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 5
vacuole 3
extracellular 2
endoplasmic reticulum 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0090g01480.t01	Wine grape	plasma membrane	74.48	75.62
Solyc10g006080.1.1	Tomato	plasma membrane	70.51	71.05
AT5G55470.1	Thale cress	plasma membrane	70.32	70.32
Bra002905.1-P	Field mustard	plasma membrane	69.38	68.86
CDY17324	Canola	plasma membrane	69.19	68.67
PGSC0003DMT400085382	Potato	plasma membrane	70.32	67.88
GSMUA_Achr5P04100_001	Banana	plasma membrane	65.97	67.12
CDY45655	Canola	plasma membrane	66.92	66.92
Bra009647.1-P	Field mustard	cytosol	8.7	64.79
KXG19894	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	64.27	64.15
HORVU7Hr1G046030.1	Barley	plasma membrane	63.89	64.14
TraesCS7A01G228400.1	Wheat	plasma membrane	63.71	63.95
TraesCS7D01G226200.1	Wheat	plasma membrane	63.52	63.76
TraesCS7B01G191300.1	Wheat	plasma membrane	63.33	63.57
Zm00001d045883_P001	Maize	plasma membrane	64.84	62.94
Os06t0318500-00	Rice	plasma membrane	63.71	62.29
KRH12862	Soybean	golgi, plasma membrane, vacuole	13.42	60.68
KRG92790	Soybean	plasma membrane	60.68	58.79
KRH34011	Soybean	plasma membrane	60.11	58.24
KRH02192	Soybean	plasma membrane	58.79	58.02
KRG96912	Soybean	plasma membrane	57.84	55.94
KRH68649	Soybean	plasma membrane	57.09	55.21
KRH50930	Soybean	mitochondrion	58.41	49.05
KRH11690	Soybean	plasma membrane	26.65	26.4
KRH36691	Soybean	plasma membrane	26.46	26.22
KRH51250	Soybean	plasma membrane	25.71	25.81

Protein Annotations

Gene3D:1.20.1530.20	EntrezGene:100813332	MapMan:24.2.8.1.1	EMBL:ACUP02005337	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1
EnsemblPlantsGene:GLYMA_08G324200	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006812
GO:GO:0006814	GO:GO:0006885	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651
GO:GO:0009987	GO:GO:0015297	GO:GO:0015299	GO:GO:0015385	GO:GO:0015386	GO:GO:0016020
GO:GO:0016021	GO:GO:0019725	GO:GO:0051453	GO:GO:0055075	GO:GO:0055085	GO:GO:0071805
GO:GO:0098719	GO:GO:1902600	InterPro:IPR038770	UniProt:K7LA97	EnsemblPlants:KRH46278	ProteinID:KRH46278
ProteinID:KRH46278.1	InterPro:NHX4	InterPro:Na+/solute_symporter_sf	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084
PANTHER:PTHR10110	PANTHER:PTHR10110:SF101	TMHMM:TMhelix	UniParc:UPI0002338C72	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:44234665..44240056

Molecular Weight (calculated)

58907.9 Da

IEP (calculated)

7.912

GRAVY (calculated)

0.655

Length

529 amino acids

Sequence
(BLAST)

001: MGMVPVNLIP EVLRNLVHEH ALVVPISLFV AVLCLCLVVG HLLEENRWIN ESILAIIVGF IAGIILLLVT KGKSSHILTF NEELFFIYLL PPIIFNAGFQ
101: VKKKQFFHNF LTIMLFGVIG VFISVSIITC GSWWLFPKLK LLGLSGQDYL AIGTIFSSTD TVCTLQVLHQ DETPLLYSLV FGEGVVNDAT SVVLFNAVQK
201: LDVSRLSGKT FSVIGEFLYL FITSTGLGVI TGLLTAYILK ALSFGRHSSV REISLMILMA YLSYMLAELF DLSGILTVFF CGILMSHYAW YNVTETSRIT
301: TRHVFATMSF IAETFIFLYV GMDALDIEKW KMTQLSYGNL MGIYSSLILL ILLGRAAFVF PLSALANYTN TRATSDQASS ITFKHQIIIW WAGLMRGAVS
401: IALAFKQFTF SGVTTDPVNA TMITNTIIVV LFSTLVFGFL TKPLIRYLLP HSATRKSISH SESGPPFDDL NLPFLSLEES AATNISRAKA SLSMLIESPV
501: FTIHRYWRRF DDAYMRPIFG GPHGNQSQC

Best Arabidopsis Sequence Match ( AT5G55470.1 )
(BLAST)

001: MSIGLTEFVT NKLAAEHPQV IPISVFIAIL CLCLVIGHLL EENRWVNESI TAILVGAASG TVILLISKGK SSHILVFDEE LFFIYLLPPI IFNAGFQVKK
101: KKFFHNFLTI MSFGVIGVFI STVIISFGTW WLFPKLGFKG LSARDYLAIG TIFSSTDTVC TLQILHQDET PLLYSLVFGE GVVNDATSVV LFNAVQKIQF
201: ESLTGWTALQ VFGNFLYLFS TSTLLGIGVG LITSFVLKTL YFGRHSTTRE LAIMVLMAYL SYMLAELFSL SGILTVFFCG VLMSHYASYN VTESSRITSR
301: HVFAMLSFIA ETFIFLYVGT DALDFTKWKT SSLSFGGTLG VSGVITALVL LGRAAFVFPL SVLTNFMNRH TERNESITFK HQVIIWWAGL MRGAVSIALA
401: FKQFTYSGVT LDPVNAAMVT NTTIVVLFTT LVFGFLTKPL VNYLLPQDAS HNTGNRGKRT EPGSPKEDAT LPLLSFDESA STNFNRAKDS ISLLMEQPVY
501: TIHRYWRKFD DTYMRPIFGG PRRENQPEC

Arabidopsis Description

NHX4Sodium/hydrogen exchanger 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8S397]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.