Factsheet for Zm00001d045883_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19894	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	91.01	93.58
TraesCS7D01G226200.1	Wheat	plasma membrane	82.39	85.2
TraesCS7A01G228400.1	Wheat	plasma membrane	82.39	85.2
HORVU7Hr1G046030.1	Barley	plasma membrane	82.2	85.01
TraesCS7B01G191300.1	Wheat	plasma membrane	82.02	84.82
Os06t0318500-00	Rice	plasma membrane	82.2	82.81
GSMUA_Achr5P04100_001	Banana	plasma membrane	64.22	67.31
VIT_19s0090g01480.t01	Wine grape	plasma membrane	63.49	66.41
KRH46278	Soybean	plasma membrane	62.94	64.84
Solyc10g006080.1.1	Tomato	plasma membrane	61.83	64.19
AT5G55470.1	Thale cress	plasma membrane	61.83	63.71
Bra002905.1-P	Field mustard	plasma membrane	60.73	62.1
CDY17324	Canola	plasma membrane	60.55	61.91
PGSC0003DMT400085382	Potato	plasma membrane	61.47	61.13
CDY45655	Canola	plasma membrane	58.35	60.11
Zm00001d022504_P001	Maize	plasma membrane	58.72	59.37
Bra009647.1-P	Field mustard	cytosol	7.34	56.34
Zm00001d024832_P002	Maize	plasma membrane	56.15	54.74
Zm00001d048732_P005	Maize	plasma membrane	54.13	54.03
Zm00001d041859_P001	Maize	mitochondrion	12.29	44.08
Zm00001d028330_P048	Maize	plasma membrane	38.72	39.07
Zm00001d048459_P007	Maize	plasma membrane	24.77	28.18
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	34.68	26.85
Zm00001d019978_P001	Maize	plasma membrane	26.24	26.68
Zm00001d025052_P007	Maize	plasma membrane	21.47	22.5
Zm00001d021844_P003	Maize	mitochondrion	36.88	21.41
Zm00001d020892_P003	Maize	plasma membrane	16.33	17.94
Zm00001d003728_P056	Maize	cytosol, plasma membrane, vacuole	25.32	17.51

Protein Annotations

Gene3D:1.20.1530.20	EntrezGene:103638329	MapMan:24.2.8.1.1	UniProt:A0A1D6NZM7	ProteinID:AQL03359.1	InterPro:Cation/H_exchanger
InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006812
GO:GO:0006814	GO:GO:0006885	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651
GO:GO:0015297	GO:GO:0015299	GO:GO:0015385	GO:GO:0016020	GO:GO:0016021	GO:GO:0035725
GO:GO:0055075	GO:GO:0055085	GO:GO:1902600	InterPro:IPR038770	InterPro:NHX4	InterPro:Na+/solute_symporter_sf
InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF101	TMHMM:TMhelix
UniParc:UPI000842A7B2	EnsemblPlantsGene:Zm00001d045883	EnsemblPlants:Zm00001d045883_P001	EnsemblPlants:Zm00001d045883_T001	SEG:seg	:

Description

Sodium/hydrogen exchanger

Coordinates

chr9:+:45473833..45477106

Molecular Weight (calculated)

60035.8 Da

IEP (calculated)

8.098

GRAVY (calculated)

0.593

Length

545 amino acids

Sequence
(BLAST)

001: MAAAAWWETL VVAAAADGTG GSSTTVVSIC MFTTVLCLCL VAGHLLEENK WVNESITALV IGCIIGVIVF LLTKGKHSHI LRFDEQLFFI YVLPPIIFNA
101: GFQVKKKQFF HNFMTIMSFG VFGVFISGAI VSAGCYWLFP KVGFGELGAV DYLALGAIFS STDTVCTLQV INQDETPRLY SLVFGEGVVN DATAVVLFNA
201: IKDLDISRLK GGVVLKVIFD FLYLFATSTV LGISIGLVTA YVLKALYFGR HSTDREVALM ALMAYLSYML AELLELSGIL TVFFCGIVMS HYAWHNVTES
301: SRITTKHIFA TLSFIAETFI FLYVGMDALD IDKWRTSKES FKTSIGIFGI LILLILLGRV AFVFPISILS NIMSGSSERT PITFKHQNVN EMTPSKIFTH
401: AKVVIWWAGL MRGAVSIALA YNQFTFSGVT SDPVHATIIT STIIVVFFTT LVFGFLTRPL ISGMLPHQSR ALSRGHSTGS NSPKDDFTLP FLSGDEGASG
501: SGIVLEQAKR SLSMMLERPV HTVHIYWRKF DDRFMRPIFG GPRSH

Best Arabidopsis Sequence Match ( AT5G55470.1 )
(BLAST)

001: MSIGLTEFVT NKLAAEHPQV IPISVFIAIL CLCLVIGHLL EENRWVNESI TAILVGAASG TVILLISKGK SSHILVFDEE LFFIYLLPPI IFNAGFQVKK
101: KKFFHNFLTI MSFGVIGVFI STVIISFGTW WLFPKLGFKG LSARDYLAIG TIFSSTDTVC TLQILHQDET PLLYSLVFGE GVVNDATSVV LFNAVQKIQF
201: ESLTGWTALQ VFGNFLYLFS TSTLLGIGVG LITSFVLKTL YFGRHSTTRE LAIMVLMAYL SYMLAELFSL SGILTVFFCG VLMSHYASYN VTESSRITSR
301: HVFAMLSFIA ETFIFLYVGT DALDFTKWKT SSLSFGGTLG VSGVITALVL LGRAAFVFPL SVLTNFMNRH TERNESITFK HQVIIWWAGL MRGAVSIALA
401: FKQFTYSGVT LDPVNAAMVT NTTIVVLFTT LVFGFLTKPL VNYLLPQDAS HNTGNRGKRT EPGSPKEDAT LPLLSFDESA STNFNRAKDS ISLLMEQPVY
501: TIHRYWRKFD DTYMRPIFGG PRRENQPEC

Arabidopsis Description

NHX4Sodium/hydrogen exchanger 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8S397]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.