Factsheet for Zm00001d024832_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 4
endoplasmic reticulum 1
vacuole 1
golgi 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21297	Sorghum	plasma membrane	95.53	97.8
Os05t0148600-01	Rice	plasma membrane	85.87	88.24
TraesCS1A01G102300.1	Wheat	plasma membrane	83.9	85.9
TraesCS1D01G093900.1	Wheat	plasma membrane	83.72	85.71
TraesCS1B01G112700.1	Wheat	plasma membrane	83.36	85.35
HORVU1Hr1G020360.2	Barley	plasma membrane	82.47	84.43
GSMUA_Achr8P06790_001	Banana	plasma membrane	70.66	73.42
GSMUA_Achr3P23840_001	Banana	plasma membrane	69.41	72.25
Zm00001d022504_P001	Maize	plasma membrane	68.52	71.06
PGSC0003DMT400027658	Potato	plasma membrane	67.62	70.39
Solyc01g067710.2.1	Tomato	plasma membrane	67.44	70.2
Zm00001d048732_P005	Maize	plasma membrane	68.52	70.15
VIT_07s0104g01280.t01	Wine grape	plasma membrane	62.43	69.94
VIT_05s0020g01960.t01	Wine grape	plasma membrane	67.26	69.5
KRH02192	Soybean	plasma membrane	65.65	68.47
PGSC0003DMT400056555	Potato	plasma membrane	30.77	68.25
GSMUA_Achr6P20250_001	Banana	plasma membrane	68.87	67.19
GSMUA_Achr2P01560_001	Banana	plasma membrane	63.51	65.99
Solyc06g008820.2.1	Tomato	plasma membrane	61.9	64.79
AT3G06370.3	Thale cress	plasma membrane	63.33	64.13
Bra020755.1-P	Field mustard	plasma membrane	60.64	62.78
CDY24699	Canola	plasma membrane	62.43	62.54
CDY05257	Canola	plasma membrane	62.43	62.32
Zm00001d041859_P001	Maize	mitochondrion	16.46	60.53
PGSC0003DMT400056556	Potato	golgi, plasma membrane	33.09	60.46
KRH50930	Soybean	mitochondrion	65.47	58.1
Zm00001d045883_P001	Maize	plasma membrane	54.74	56.15
Zm00001d028330_P048	Maize	plasma membrane	47.23	48.89
Zm00001d048459_P007	Maize	plasma membrane	28.8	33.61
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	41.86	33.24
Zm00001d025052_P007	Maize	plasma membrane	26.12	28.08
Zm00001d021844_P003	Maize	mitochondrion	45.98	27.37
Zm00001d019978_P001	Maize	plasma membrane	25.58	26.68
Zm00001d003728_P056	Maize	cytosol, plasma membrane, vacuole	31.13	22.08
Zm00001d020892_P003	Maize	plasma membrane	15.38	17.34

Protein Annotations

Gene3D:1.20.1530.20	EntrezGene:100383429	MapMan:24.2.8.1.1	UniProt:A0A1D6J274	ProteinID:AQK42148.1	InterPro:Cation/H_exchanger
InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0006814	GO:GO:0006885	GO:GO:0008150	GO:GO:0015297	GO:GO:0015299	GO:GO:0015385
GO:GO:0016020	GO:GO:0016021	GO:GO:0035725	GO:GO:0055085	GO:GO:1902600	InterPro:IPR038770
InterPro:Na+/solute_symporter_sf	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF116
TMHMM:TMhelix	UniParc:UPI0008441D5E	EnsemblPlantsGene:Zm00001d024832	EnsemblPlants:Zm00001d024832_P002	EnsemblPlants:Zm00001d024832_T002	SEG:seg

Description

Sodium/hydrogen exchanger

Coordinates

chr10:+:90134129..90141743

Molecular Weight (calculated)

61365.2 Da

IEP (calculated)

8.547

GRAVY (calculated)

0.648

Length

559 amino acids

Sequence
(BLAST)

001: MGLGLGALLK SGGLSVSDHD AIVSINIFIA LLCSCIVIGH LLEGNRWVNE SITALVMGLI TGGVILLVTN GTNSRILVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFI TIILFGAIGT LISFVIISLG AMGLFKKLDV GPLELGDYLA IGAIFSATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIENL
201: DIDNFDAIVL LNFVGKFLYL FFTSTILGVA TGLLSAYIIK KLCFARHSTD REVSIMILMA YLSYMISMLL DLSGILTVFF CGIVMSHYTW HNVTESSRVT
301: TKHTFATLSF IAEIFLFLYV GMDALDIEKW KLASSSPKKP IALSAIILGL VMVGRAAFVF PLSFLSNLSK KEARPKISFK QQVIIWWAGL MRGAVSIALA
401: YNKEALLYNR PCKILQFTAS GHTEVRVNAI MITSTVIVVL FSTMVFGLLT KPLLSLLIPP RTGLNTSSLL SSQSMLDPLL TSMMGSDFDV GQINSPQYNL
501: QFILTAPARS VHRLWRKFDD RFMRPVFGGR GFVPFVPGSP VERSVPESHL GTVTEAERS

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.