Factsheet for Bra020755.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24699	Canola	plasma membrane	100.0	96.77
AT3G06370.3	Thale cress	plasma membrane	88.15	86.23
VIT_05s0020g01960.t01	Wine grape	plasma membrane	70.93	70.79
KRH02192	Soybean	plasma membrane	69.63	70.15
GSMUA_Achr11P...	Banana	plasma membrane	69.44	69.83
GSMUA_Achr8P21980_001	Banana	plasma membrane	69.63	69.37
GSMUA_Achr3P23840_001	Banana	plasma membrane	68.33	68.72
PGSC0003DMT400027658	Potato	plasma membrane	68.33	68.72
KXG36886	Sorghum	plasma membrane	68.15	68.66
Bra020599.1-P	Field mustard	plasma membrane	65.19	68.62
Solyc01g067710.2.1	Tomato	plasma membrane	68.15	68.53
GSMUA_Achr8P06790_001	Banana	plasma membrane	68.15	68.4
Zm00001d022504_P001	Maize	plasma membrane	68.15	68.27
Bra039469.1-P	Field mustard	plasma membrane	68.7	67.95
Os07t0666900-01	Rice	vacuole	66.67	67.29
TraesCS2A01G121000.1	Wheat	plasma membrane	66.48	66.73
Bra036110.1-P	Field mustard	plasma membrane	67.04	66.67
TraesCS2D01G123000.1	Wheat	plasma membrane, vacuole	65.56	65.8
GSMUA_Achr10P...	Banana	plasma membrane	65.74	65.38
HORVU2Hr1G021020.4	Barley	plasma membrane	67.59	64.49
TraesCS4A01G145300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.33	63.33
GSMUA_Achr2P01560_001	Banana	plasma membrane	62.96	63.2
Os11t0648000-01	Rice	plasma membrane	63.7	63.12
TraesCS4D01G147600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.15	63.03
GSMUA_Achr6P20250_001	Banana	plasma membrane	66.11	62.3
EES10186	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	62.41	62.29
Zm00001d048732_P005	Maize	plasma membrane	62.96	62.27
KXG21297	Sorghum	plasma membrane	62.59	61.9
Os05t0148600-01	Rice	plasma membrane	62.22	61.76
TraesCS4B01G125700.1	Wheat	golgi, plasma membrane, vacuole	58.52	61.72
TraesCS1D01G093900.1	Wheat	plasma membrane	61.48	60.81
Zm00001d024832_P002	Maize	plasma membrane	62.78	60.64
TraesCS1B01G112700.1	Wheat	plasma membrane	61.3	60.62
TraesCS1A01G102300.1	Wheat	plasma membrane	61.3	60.62
HORVU1Hr1G020360.2	Barley	plasma membrane	60.74	60.07
KRH50930	Soybean	mitochondrion	69.81	59.84
TraesCS2B01G141900.1	Wheat	plasma membrane	61.48	55.52
Bra009647.1-P	Field mustard	cytosol	7.22	54.93
Bra002905.1-P	Field mustard	plasma membrane	53.33	54.03
HORVU4Hr1G033760.1	Barley	mitochondrion, plastid	62.59	52.4
Bra009975.1-P	Field mustard	golgi, plasma membrane, plastid	14.07	50.0
Zm00001d028330_P048	Maize	plasma membrane	44.07	44.07
Zm00001d048459_P007	Maize	plasma membrane	25.19	28.39
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	36.67	28.12
Bra035130.1-P	Field mustard	cytosol, golgi, plasma membrane	22.22	23.48
Zm00001d021844_P003	Maize	mitochondrion	40.19	23.11
Zm00001d025052_P007	Maize	plasma membrane	21.85	22.69
Zm00001d003728_P056	Maize	cytosol, plasma membrane, vacuole	26.48	18.15

Protein Annotations

MapMan:24.2.8.1.1	EnsemblPlantsGene:Bra020755	EnsemblPlants:Bra020755.1	EnsemblPlants:Bra020755.1-P	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006812	GO:GO:0006814
GO:GO:0006885	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0015297
GO:GO:0015299	GO:GO:0015385	GO:GO:0016020	GO:GO:0016021	GO:GO:0035725	GO:GO:0055075
GO:GO:0055085	GO:GO:1902600	UniProt:M4DW61	InterPro:Na/H_exchanger_plant	InterPro:NaH_exchanger	PFAM:PF00999
PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF117	TMHMM:TMhelix	UniParc:UPI0002545F64	SEG:seg

Description

AT3G06370 (E=2e-114) NHX4, ATNHX4 | NHX4 (SODIUM HYDROGEN EXCHANGER 4); sodium ion transmembrane transporter/ sodium:hydrogen antiporter

Coordinates

chrA02:-:23268221..23271279

Molecular Weight (calculated)

59857.2 Da

IEP (calculated)

6.613

GRAVY (calculated)

0.438

Length

540 amino acids

Sequence
(BLAST)

001: MAFGLLNTVL EKSETLLGSD HASVVSMNLF VALLCACIVL GHLLEETRWM NESITALIIG SCTGIVILLI SGGKSSRILV FSEDLFFIYL LPPIIFNAGF
101: QVKKKQFFRN FMTIMLFGAI GTLISFAIIS LGAMHFFEKM NIGDLTISDY LAIGAIFSAT DSVCTLQVLN KDETPLLYSL VFGEGVVNDA TSVVLFNAIQ
201: RFDLTHINST IVLEFAGNFF SLFILSTALG VAHSTDREVA LMMLIAYLSY MLAELFHLSS ILTVFFCGIT MSHYTWHNVT DKSKVTTKHT FAALSFLAEI
301: FIFLYVGMDA LDIEKWDVVR NSPGQSIGVS AILLGLILLG RAAFVFPLSF LSNLTKSSPD EKIDWKKQVT IWWAGLMRGA VSMALAYNQF TTSGHTKLLG
401: NAIMITSTIT VVLFSTVVFG LLTKPLVKHL QPPSKKPSTP TSSFHEPLLN GDGSYIENHE PLHRTQGQSD YILEQITLRL FLSTPSRAIH HYWRSFDNAV
501: MRRIFGGRGV SEVVPGSPID TSVRQLWTED VENKEQYAEP

Best Arabidopsis Sequence Match ( AT3G06370.4 )
(BLAST)

001: MVIGLSTMLE KTEALFASDH ASVVSMNLFV ALLCACIVLG HLLEETRWMN ESITALIIGS CTGIVILLIS GGKSSRILVF SEDLFFIYLL PPIIFNAGFQ
101: VKKKQFFRNF MTIMLFGAIG TLISFVIISF GAKHLFEKMN IGDLTIADYL AIGAIFSATD SVCTLQVLNQ DETPLLYSLV FGEGVVNDAT SVVLFNAIQR
201: FDLTNINSAI ALEFAGNFFY LFILSTALGV AAGLLSAFVI KKLYIGRHST DREVALMMLL AYLSYMLAEL FHLSSILTVF FCGIVMSHYT WHNVTDKSKV
301: TTKHTFAAMS FLAEIFIFLY VGMDALDIEK WDVVRNSPGQ SIGVSSILLG LILLGRAAFV FPLSFLSNLT KSSPDEKIDL KKQVTIWWAG LMRGAVSMAL
401: AYNQFTTSGH TKVLGNAIMI TSTITVVLFS TVVFGLLTKP LVKHLQPSSK QSSTTALQIT LRSSFHDPIL HEPLLSTQGQ SEYDPEQHVS FRMFWKSPSR
501: AIHHYWRKFD NAVMRRIFGG RGVSPVVPGS PIENSVPQWS EEVENKEQNG EP

Arabidopsis Description

NHX4NHX4 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS48]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.