Factsheet for TraesCS4D01G147600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	endoplasmic reticulum, plasma membrane, vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G125700.1	Wheat	golgi, plasma membrane, vacuole	94.08	99.41
TraesCS4A01G145300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	99.08	99.26
EES10186	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	86.32	86.32
Zm00001d048732_P005	Maize	plasma membrane	86.88	86.08
Os11t0648000-01	Rice	plasma membrane	86.32	85.69
HORVU4Hr1G033760.1	Barley	mitochondrion, plastid	97.97	82.17
GSMUA_Achr8P06790_001	Banana	plasma membrane	72.27	72.68
GSMUA_Achr3P23840_001	Banana	plasma membrane	71.9	72.44
VIT_05s0020g01960.t01	Wine grape	plasma membrane	71.9	71.9
Solyc01g067710.2.1	Tomato	plasma membrane	71.35	71.88
PGSC0003DMT400027658	Potato	plasma membrane	71.16	71.69
KRH02192	Soybean	plasma membrane	69.87	70.52
TraesCS2D01G123000.1	Wheat	plasma membrane, vacuole	70.06	70.45
VIT_07s0104g01280.t01	Wine grape	plasma membrane	64.69	70.14
TraesCS1D01G093900.1	Wheat	plasma membrane	70.24	69.6
GSMUA_Achr2P01560_001	Banana	plasma membrane	67.28	67.66
GSMUA_Achr6P20250_001	Banana	plasma membrane	69.5	65.62
Solyc06g008820.2.1	Tomato	plasma membrane	64.14	64.98
PGSC0003DMT400056555	Potato	plasma membrane	30.13	64.68
AT3G06370.3	Thale cress	plasma membrane	65.8	64.49
PGSC0003DMT400056556	Potato	golgi, plasma membrane	36.04	63.73
CDY24699	Canola	plasma membrane	65.25	63.26
CDY05257	Canola	plasma membrane	65.43	63.21
Bra020755.1-P	Field mustard	plasma membrane	63.03	63.15
KRH50930	Soybean	mitochondrion	69.69	59.84
TraesCS7D01G226200.1	Wheat	plasma membrane	55.45	56.93
Zm00001d028330_P048	Maize	plasma membrane	55.27	55.37
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	48.8	37.5
Zm00001d048459_P007	Maize	plasma membrane	32.35	36.53
Zm00001d025052_P007	Maize	plasma membrane	29.39	30.58
Zm00001d021844_P003	Maize	mitochondrion	51.39	29.61
TraesCS7D01G241200.1	Wheat	plasma membrane	27.91	27.81
TraesCS5D01G180800.1	Wheat	plasma membrane	27.36	27.72
TraesCS5D01G268200.1	Wheat	plasma membrane	26.8	27.26
Zm00001d003728_P056	Maize	cytosol, plasma membrane, vacuole	35.12	24.11

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885
GO:GO:0008150	GO:GO:0015299	GO:GO:0015385	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:IPR038770	InterPro:Na+/solute_symporter_sf	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110
PANTHER:PTHR10110:SF154	TIGRFAMs:TIGR00840	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G147600	EnsemblPlants:TraesCS4D01G147600.1	SEG:seg

Description

No Description!

Coordinates

chr4D:+:139042304..139046918

Molecular Weight (calculated)

59409.2 Da

IEP (calculated)

8.296

GRAVY (calculated)

0.554

Length

541 amino acids

Sequence
(BLAST)

001: MMGLGLGDPP ADYGSIMAVG LFVALMCICI IVGHLLEENR WMNESTTALL LGLGAGTVIL FASSGKNSRL MVFSEDLFFI YLLPPIIFNA GFQVKKKQFF
101: RNFMTITLFA VVGTLISFSI ISLGAMGLIS RLNIGSLELG DYLALGAIFS ATDSVCTLQV LSQDETPFLY SLVFGEGVVN DATSVVLFNA IQNFDLGNFS
201: SLKFLQFIGN FLYLFGASTF LGVASGLLSA YVIKKLYFGR HSTDREVAIM MLMAYLSYML AELLDLSGIL TVFFCGIVMS HYTWHNVTES SRVTTKHAFA
301: TLSFISETFL FLYVGMDALD IEKWKIVSET YSPMKSIALS SIILALVLVA RAAFVFPLSY LSNLTKETPG EKISIRQQVI IWWAGLMRGA VSIALAYNKF
401: AKSGHTQLPS NAIMITSTII IVLFSTIVFG LLTKPLIRLL IPARHLTREV SALSEPSSPK SFLEQLPGNG PETDLENAVS IRRPTSLRML LASPTRSVHH
501: YWRKFDNAFM RPVFGGRGFV PFVPGSPTES SVPLLAHGSE N

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.