Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G173800.1 | Wheat | plasma membrane | 99.81 | 99.81 |
| TraesCS5A01G176100.3 | Wheat | plasma membrane | 99.63 | 99.44 |
| KXG35307 | Sorghum | plastid | 93.63 | 93.28 |
| Zm00001d019978_P001 | Maize | plasma membrane | 93.26 | 92.91 |
| Os09t0286400-01 | Rice | plasma membrane | 91.39 | 91.22 |
| HORVU5Hr1G053720.2 | Barley | plastid | 99.25 | 88.33 |
| KRH11690 | Soybean | plasma membrane | 77.9 | 77.9 |
| KRH51250 | Soybean | plasma membrane | 76.4 | 77.42 |
| KRH36691 | Soybean | plasma membrane | 77.15 | 77.15 |
| Solyc04g056600.2.1 | Tomato | plasma membrane | 76.03 | 76.46 |
| AT1G79610.1 | Thale cress | plasma membrane | 75.84 | 75.7 |
| GSMUA_Achr2P05520_001 | Banana | plasma membrane | 34.46 | 74.49 |
| AT1G54370.1 | Thale cress | plasma membrane | 72.1 | 73.9 |
| VIT_15s0024g00280.t01 | Wine grape | golgi, plasma membrane | 43.26 | 73.33 |
| Bra035130.1-P | Field mustard | cytosol, golgi, plasma membrane | 69.29 | 72.41 |
| CDX79331 | Canola | plasma membrane | 74.53 | 71.45 |
| CDX67985 | Canola | plasma membrane | 74.34 | 71.27 |
| VIT_15s0024g00260.t01 | Wine grape | plasma membrane | 32.02 | 70.66 |
| TraesCS5D01G268200.1 | Wheat | plasma membrane | 70.22 | 70.49 |
| TraesCS7D01G241200.1 | Wheat | plasma membrane | 70.22 | 69.06 |
| CDX88553 | Canola | plasma membrane | 73.22 | 67.07 |
| CDX87370 | Canola | plasma membrane | 74.34 | 61.65 |
| TraesCS7D01G226200.1 | Wheat | plasma membrane | 27.15 | 27.51 |
| TraesCS4D01G147600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 27.72 | 27.36 |
| TraesCS2D01G123000.1 | Wheat | plasma membrane, vacuole | 26.78 | 26.58 |
| TraesCS1D01G093900.1 | Wheat | plasma membrane | 26.03 | 25.46 |
Protein Annotations
| MapMan:24.2.8.1.1 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006812 | GO:GO:0006814 | GO:GO:0006885 | GO:GO:0008150 | GO:GO:0015299 |
| GO:GO:0015385 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:NaH_exchanger | PFAM:PF00999 |
| PRINTS:PR01084 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF127 | TIGRFAMs:TIGR00840 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5D01G180800 |
| EnsemblPlants:TraesCS5D01G180800.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:281022548..281031473
Molecular Weight (calculated)
58435.1 Da
IEP (calculated)
4.817
GRAVY (calculated)
0.460
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLELSMALA APPGGGLLAP PPPAPPGKEQ QVAGVGILLQ ISMLVLSFVL GHVLRRHRFY YLPEASASLL IGLVVGGLAN ISNTETNTRT WFNFHEEFFF
101: LFLLPPIIFQ SGFSLSPKPF FANFGAIVTF AILGTFIASI VTGMLVYLGG LTFLMYKLPL VECLMFGALI SATDPVTVLS IFQELGSDVN LYALVFGESV
201: LNDAMAISLY RTMSSVRSNA AGGENIFMMI LQFLEIFVGS MSSGVGVGFI SSLLFKYAGL DIDNLQNLEC CLFVLFPYFS YMLAEGLGLS GIVSILFTGM
301: VMKHYTYSNL SDNSQRFVSA FFHLLSSLAE TFVFIYMGFD IAMEEHSWSH VGFIIFSIIF IIVARAANVF SCAYLVNISR PEHRRIPLNH QKALCFSGLR
401: GAMAFALALQ SVHELPEGHG KTILTATTAI VVLTVLLIGG STGTMLEALD VIGDENTSIE TYEDNNGYIP PTYEEGTSSG GGLRMKLKEF HKSTTSFTAL
501: DKNYLTPFFT SQTDEDADDF GDQPQNQRRG FYDQ
101: LFLLPPIIFQ SGFSLSPKPF FANFGAIVTF AILGTFIASI VTGMLVYLGG LTFLMYKLPL VECLMFGALI SATDPVTVLS IFQELGSDVN LYALVFGESV
201: LNDAMAISLY RTMSSVRSNA AGGENIFMMI LQFLEIFVGS MSSGVGVGFI SSLLFKYAGL DIDNLQNLEC CLFVLFPYFS YMLAEGLGLS GIVSILFTGM
301: VMKHYTYSNL SDNSQRFVSA FFHLLSSLAE TFVFIYMGFD IAMEEHSWSH VGFIIFSIIF IIVARAANVF SCAYLVNISR PEHRRIPLNH QKALCFSGLR
401: GAMAFALALQ SVHELPEGHG KTILTATTAI VVLTVLLIGG STGTMLEALD VIGDENTSIE TYEDNNGYIP PTYEEGTSSG GGLRMKLKEF HKSTTSFTAL
501: DKNYLTPFFT SQTDEDADDF GDQPQNQRRG FYDQ
001: MSSELQISPA IHDPQGQEKQ QQAAGVGILL QIMMLVLSFV LGHVLRRHKF YYLPEASASL LIGLIVGGLA NISNTETSIR TWFNFHDEFF FLFLLPPIIF
101: QSGFSLQPKP FFSNFGAIVT FSVLGTFVAS MVTGLLVYLG GVMFLMYRLP FVECLMFGSL ISATDPVTVL SIFQELGSDV NLYALVFGES VLNDAMAISL
201: YRTMSLVRSH SSGQNFFMVI VRFLETFVGS MSAGVGVGFT SALLFKYAGL DVDNLQNLEC CLFVLFPYFS YMLAEGLSLS GIVSILFTGI VMKHYTYSNL
301: SANSQRFVSA FFHLISSLAE TFVFIYMGFD IAMEKHSWSH LGFIFFSILF IVIARAANVF GCGYLVNLAR PAHRKIPMTH QKALWYSGLR GAMAFALALQ
401: SVHDLPEGHG QTIFTATTAI VVLTVLLIGG STGTMLEALE VVGDSHDTSL GDGFEVVNSR YMTSYDDEDT PPGSGFRTKL REFHKSAASF TELDRNYLTP
501: FFTSNNGDYD DEGNMEQHHE ERIPFTRRGN LNNRG
101: QSGFSLQPKP FFSNFGAIVT FSVLGTFVAS MVTGLLVYLG GVMFLMYRLP FVECLMFGSL ISATDPVTVL SIFQELGSDV NLYALVFGES VLNDAMAISL
201: YRTMSLVRSH SSGQNFFMVI VRFLETFVGS MSAGVGVGFT SALLFKYAGL DVDNLQNLEC CLFVLFPYFS YMLAEGLSLS GIVSILFTGI VMKHYTYSNL
301: SANSQRFVSA FFHLISSLAE TFVFIYMGFD IAMEKHSWSH LGFIFFSILF IVIARAANVF GCGYLVNLAR PAHRKIPMTH QKALWYSGLR GAMAFALALQ
401: SVHDLPEGHG QTIFTATTAI VVLTVLLIGG STGTMLEALE VVGDSHDTSL GDGFEVVNSR YMTSYDDEDT PPGSGFRTKL REFHKSAASF TELDRNYLTP
501: FFTSNNGDYD DEGNMEQHHE ERIPFTRRGN LNNRG
Arabidopsis Description
NHX6Sodium/hydrogen exchanger 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.