Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11690 | Soybean | plasma membrane | 81.92 | 81.46 |
| KRH36691 | Soybean | plasma membrane | 81.36 | 80.9 |
| KRH51250 | Soybean | plasma membrane | 78.72 | 79.32 |
| AT1G79610.1 | Thale cress | plasma membrane | 79.47 | 78.88 |
| KXG35307 | Sorghum | plastid | 77.78 | 77.05 |
| Os09t0286400-01 | Rice | plasma membrane | 77.4 | 76.82 |
| Zm00001d019978_P001 | Maize | plasma membrane | 77.4 | 76.68 |
| TraesCS5A01G176100.3 | Wheat | plasma membrane | 76.84 | 76.26 |
| TraesCS5B01G173800.1 | Wheat | plasma membrane | 76.65 | 76.22 |
| VIT_15s0024g00280.t01 | Wine grape | golgi, plasma membrane | 45.2 | 76.19 |
| GSMUA_Achr2P05520_001 | Banana | plasma membrane | 35.4 | 76.11 |
| TraesCS5D01G180800.1 | Wheat | plasma membrane | 76.46 | 76.03 |
| Bra035130.1-P | Field mustard | cytosol, golgi, plasma membrane | 71.75 | 74.56 |
| VIT_15s0024g00260.t01 | Wine grape | plasma membrane | 33.52 | 73.55 |
| CDX67985 | Canola | plasma membrane | 76.84 | 73.25 |
| CDX79331 | Canola | plasma membrane | 76.65 | 73.07 |
| GSMUA_Achr10P... | Banana | peroxisome, plasma membrane, plastid | 67.42 | 71.03 |
| TraesCS5B01G259100.2 | Wheat | plasma membrane | 69.11 | 70.31 |
| CDX88553 | Canola | plasma membrane | 76.65 | 69.81 |
| KXG35876 | Sorghum | plasma membrane | 70.24 | 69.07 |
| TraesCS5A01G260700.1 | Wheat | plasma membrane | 69.11 | 68.98 |
| TraesCS5D01G268200.1 | Wheat | plasma membrane | 69.11 | 68.98 |
| TraesCS7B01G149100.1 | Wheat | plasma membrane | 69.3 | 68.53 |
| HORVU7Hr1G049400.10 | Barley | endoplasmic reticulum, plasma membrane | 68.36 | 67.85 |
| HORVU5Hr1G053720.2 | Barley | plastid | 76.46 | 67.67 |
| TraesCS7A01G242300.1 | Wheat | plasma membrane | 68.93 | 67.53 |
| TraesCS7D01G241200.1 | Wheat | plasma membrane | 68.93 | 67.4 |
| CDX87370 | Canola | plasma membrane | 77.97 | 64.29 |
| HORVU5Hr1G072440.26 | Barley | golgi, mitochondrion, nucleus, plastid | 59.89 | 58.56 |
| Os09t0482620-00 | Rice | golgi, mitochondrion, peroxisome | 28.25 | 57.03 |
| Zm00001d020892_P003 | Maize | plasma membrane | 45.2 | 48.39 |
| Solyc01g098190.2.1 | Tomato | plasma membrane | 27.68 | 27.43 |
| Solyc01g067710.2.1 | Tomato | plasma membrane | 26.18 | 25.88 |
| Solyc10g006080.1.1 | Tomato | plasma membrane | 25.24 | 25.52 |
| Solyc06g008820.2.1 | Tomato | plasma membrane | 24.29 | 24.16 |
Protein Annotations
| MapMan:24.2.8.1.1 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0006811 | GO:GO:0006812 | GO:GO:0006814 | GO:GO:0006885 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0015297 | GO:GO:0015299 | GO:GO:0015385 | GO:GO:0015386 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0019725 | GO:GO:0035725 | GO:GO:0051453 | GO:GO:0055085 | GO:GO:0071805 | GO:GO:0098719 |
| GO:GO:1902600 | UniProt:K4BSV8 | InterPro:NaH_exchanger | PFAM:PF00999 | PRINTS:PR01084 | PANTHER:PTHR10110 |
| PANTHER:PTHR10110:SF127 | EnsemblPlantsGene:Solyc04g056600.2 | EnsemblPlants:Solyc04g056600.2.1 | TIGRFAMs:TIGR00840 | TMHMM:TMhelix | UniParc:UPI0002765E67 |
| SEG:seg | : | : | : | : | : |
Description
Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:K4BSV8]
Coordinates
chr4:-:54562041..54577819
Molecular Weight (calculated)
58593.0 Da
IEP (calculated)
5.517
GRAVY (calculated)
0.405
Length
531 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDHLQISPA GAKAIPGKEQ QAAGYGILLQ IMMLVLSFVI GHVLRRRHFY YIPEASASLL IGLIVGGLAN VSDTETSIRA WFNFHEEFFF LFLLPPIIFQ
101: SGFSLSPKPF FSNFGAIITF AILGTFIASF VTGILVYLGG VTYLMYRLPF VECLMFGALI SATDPVTVLS IFQELGTDVN LYALVFGESV LNDAMAISLY
201: RTMSLVRSHM STDQNYFMIT IRFVETFMGS LSAGVGVGFV SALLFKYAGL DIDNLQNLES CLFVLFPYFS YMLAEGLGLS GIVSILFTGV VMKRYTYPNL
301: SESSQRFVSA FFHLISSLAE TFVFIYMGFD IAMEKHSWSH VGFIFFSILF IVIARAANVF GCAYLVNLVR PPHQKIPAKH QKALWYSGLR GAMAFALALQ
401: SVHDLPEGHG QTIFTATTAI VVLTVLIIGG STGTMLEALE VVGDGQSGSM DETFEGNNGY IAPSYSDESY DGEPSSGNRF RMKLKEFHKS TTSFSALDKN
501: YLTPFFTTQG GDEDEDEPIM HSSRRAGYDG H
101: SGFSLSPKPF FSNFGAIITF AILGTFIASF VTGILVYLGG VTYLMYRLPF VECLMFGALI SATDPVTVLS IFQELGTDVN LYALVFGESV LNDAMAISLY
201: RTMSLVRSHM STDQNYFMIT IRFVETFMGS LSAGVGVGFV SALLFKYAGL DIDNLQNLES CLFVLFPYFS YMLAEGLGLS GIVSILFTGV VMKRYTYPNL
301: SESSQRFVSA FFHLISSLAE TFVFIYMGFD IAMEKHSWSH VGFIFFSILF IVIARAANVF GCAYLVNLVR PPHQKIPAKH QKALWYSGLR GAMAFALALQ
401: SVHDLPEGHG QTIFTATTAI VVLTVLIIGG STGTMLEALE VVGDGQSGSM DETFEGNNGY IAPSYSDESY DGEPSSGNRF RMKLKEFHKS TTSFSALDKN
501: YLTPFFTTQG GDEDEDEPIM HSSRRAGYDG H
001: MSSELQISPA IHDPQGQEKQ QQAAGVGILL QIMMLVLSFV LGHVLRRHKF YYLPEASASL LIGLIVGGLA NISNTETSIR TWFNFHDEFF FLFLLPPIIF
101: QSGFSLQPKP FFSNFGAIVT FSVLGTFVAS MVTGLLVYLG GVMFLMYRLP FVECLMFGSL ISATDPVTVL SIFQELGSDV NLYALVFGES VLNDAMAISL
201: YRTMSLVRSH SSGQNFFMVI VRFLETFVGS MSAGVGVGFT SALLFKYAGL DVDNLQNLEC CLFVLFPYFS YMLAEGLSLS GIVSILFTGI VMKHYTYSNL
301: SANSQRFVSA FFHLISSLAE TFVFIYMGFD IAMEKHSWSH LGFIFFSILF IVIARAANVF GCGYLVNLAR PAHRKIPMTH QKALWYSGLR GAMAFALALQ
401: SVHDLPEGHG QTIFTATTAI VVLTVLLIGG STGTMLEALE VVGDSHDTSL GDGFEVVNSR YMTSYDDEDT PPGSGFRTKL REFHKSAASF TELDRNYLTP
501: FFTSNNGDYD DEGNMEQHHE ERIPFTRRGN LNNRG
101: QSGFSLQPKP FFSNFGAIVT FSVLGTFVAS MVTGLLVYLG GVMFLMYRLP FVECLMFGSL ISATDPVTVL SIFQELGSDV NLYALVFGES VLNDAMAISL
201: YRTMSLVRSH SSGQNFFMVI VRFLETFVGS MSAGVGVGFT SALLFKYAGL DVDNLQNLEC CLFVLFPYFS YMLAEGLSLS GIVSILFTGI VMKHYTYSNL
301: SANSQRFVSA FFHLISSLAE TFVFIYMGFD IAMEKHSWSH LGFIFFSILF IVIARAANVF GCGYLVNLAR PAHRKIPMTH QKALWYSGLR GAMAFALALQ
401: SVHDLPEGHG QTIFTATTAI VVLTVLLIGG STGTMLEALE VVGDSHDTSL GDGFEVVNSR YMTSYDDEDT PPGSGFRTKL REFHKSAASF TELDRNYLTP
501: FFTSNNGDYD DEGNMEQHHE ERIPFTRRGN LNNRG
Arabidopsis Description
NHX6Sodium/hydrogen exchanger 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.