Factsheet for Os09t0482620-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, golgi

Predictor Summary:

nucleus 1
mitochondrion 3
golgi 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0024g00260.t01	Wine grape	plasma membrane	47.53	51.65
TraesCS5B01G259100.2	Wheat	plasma membrane	64.64	32.57
TraesCS5D01G268200.1	Wheat	plasma membrane	64.64	31.95
TraesCS5A01G260700.1	Wheat	plasma membrane	64.64	31.95
KXG35876	Sorghum	plasma membrane	65.02	31.67
GSMUA_Achr10P...	Banana	peroxisome, plasma membrane, plastid	56.65	29.56
KRH36691	Soybean	plasma membrane	57.41	28.28
Solyc04g056600.2.1	Tomato	plasma membrane	57.03	28.25
KRH11690	Soybean	plasma membrane	57.03	28.09
KRH51250	Soybean	plasma membrane	55.89	27.89
Os09t0286400-01	Rice	plasma membrane	56.65	27.85
AT1G54370.1	Thale cress	plasma membrane	53.61	27.06
Bra035130.1-P	Field mustard	cytosol, golgi, plasma membrane	52.47	27.01
AT1G79610.1	Thale cress	plasma membrane	53.99	26.54
CDX79331	Canola	plasma membrane	53.61	25.31
CDX67985	Canola	plasma membrane	53.23	25.13
HORVU5Hr1G072440.26	Barley	golgi, mitochondrion, nucleus, plastid	49.81	24.13
CDX88553	Canola	plasma membrane	51.33	23.16
Zm00001d020892_P003	Maize	plasma membrane	42.59	22.58
CDX87370	Canola	plasma membrane	53.23	21.74
Os11t0648000-01	Rice	plasma membrane	24.71	11.93
Os05t0148600-01	Rice	plasma membrane	23.19	11.21
Os07t0666900-01	Rice	vacuole	22.43	11.03
Os06t0318500-00	Rice	plasma membrane	22.43	10.91
VIT_15s0024g00280.t01	Wine grape	golgi, plasma membrane	6.08	5.08

Protein Annotations

MapMan:24.2.8.1.1	UniProt:A0A0P0XNN5	ProteinID:BAT08660.1	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005886	GO:GO:0006810	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885	GO:GO:0008150
GO:GO:0009987	GO:GO:0015297	GO:GO:0015299	GO:GO:0015385	GO:GO:0015386	GO:GO:0016020
GO:GO:0016021	GO:GO:0019725	GO:GO:0035725	GO:GO:0051453	GO:GO:0055085	GO:GO:0071805
GO:GO:0098719	GO:GO:1902600	InterPro:NaH_exchanger	EnsemblPlantsGene:Os09g0482620	EnsemblPlants:Os09t0482620-00	PFAM:PF00999
PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF127	TMHMM:TMhelix	UniParc:UPI000393B5CB	SEG:seg

Description

OsSTA230Similar to Sodium/hydrogen exchanger 6. (Os09t0482620-00)

Coordinates

chr9:-:18543577..18549110

Molecular Weight (calculated)

28343.9 Da

IEP (calculated)

5.051

GRAVY (calculated)

0.628

Length

263 amino acids

Sequence
(BLAST)

001: MTRTGSGRGE RTRDDRVGGE EEEERSIDQA RGGVGAAAGE MVAAEAAAAP APPHDAVAAV AVGMVGAAGT VDEQKAAGVG ILLQISMLVV SFVLGHVLRR
101: RKVYYIPEAS ASLLIGMIVG GLAKISNTQR SIRRWFNFRE DFFLLFLLPP IILYPFLYLD FKPFFSNFGA IITFAILGTF IASIVTGLLV YVGGLIYIVY
201: KLPLVECMMF GALVSATDPV TVLSIFQELG TDVNLYALVF GESVLNDAVC ITLLLFNTSL WLH

Best Arabidopsis Sequence Match ( AT1G79610.1 )
(BLAST)

001: MSSELQISPA IHDPQGQEKQ QQAAGVGILL QIMMLVLSFV LGHVLRRHKF YYLPEASASL LIGLIVGGLA NISNTETSIR TWFNFHDEFF FLFLLPPIIF
101: QSGFSLQPKP FFSNFGAIVT FSVLGTFVAS MVTGLLVYLG GVMFLMYRLP FVECLMFGSL ISATDPVTVL SIFQELGSDV NLYALVFGES VLNDAMAISL
201: YRTMSLVRSH SSGQNFFMVI VRFLETFVGS MSAGVGVGFT SALLFKYAGL DVDNLQNLEC CLFVLFPYFS YMLAEGLSLS GIVSILFTGI VMKHYTYSNL
301: SANSQRFVSA FFHLISSLAE TFVFIYMGFD IAMEKHSWSH LGFIFFSILF IVIARAANVF GCGYLVNLAR PAHRKIPMTH QKALWYSGLR GAMAFALALQ
401: SVHDLPEGHG QTIFTATTAI VVLTVLLIGG STGTMLEALE VVGDSHDTSL GDGFEVVNSR YMTSYDDEDT PPGSGFRTKL REFHKSAASF TELDRNYLTP
501: FFTSNNGDYD DEGNMEQHHE ERIPFTRRGN LNNRG

Arabidopsis Description

NHX6Sodium/hydrogen exchanger 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.