Factsheet for Os06t0318500-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 4
vacuole 4
extracellular 2
endoplasmic reticulum 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G228400.1	Wheat	plasma membrane	85.03	87.29
HORVU7Hr1G046030.1	Barley	plasma membrane	84.84	87.1
TraesCS7D01G226200.1	Wheat	plasma membrane	84.66	86.91
TraesCS7B01G191300.1	Wheat	plasma membrane	84.66	86.91
KXG19894	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	82.62	84.34
Zm00001d045883_P001	Maize	plasma membrane	82.81	82.2
GSMUA_Achr5P04100_001	Banana	plasma membrane	65.25	67.88
VIT_19s0090g01480.t01	Wine grape	plasma membrane	64.14	66.6
AT5G55470.1	Thale cress	plasma membrane	63.59	65.03
Solyc10g006080.1.1	Tomato	plasma membrane	62.11	64.0
KRH46278	Soybean	plasma membrane	62.29	63.71
Bra002905.1-P	Field mustard	plasma membrane	61.18	62.1
CDY17324	Canola	plasma membrane	60.81	61.73
PGSC0003DMT400085382	Potato	plasma membrane	61.55	60.77
CDY45655	Canola	plasma membrane	58.41	59.74
Bra009647.1-P	Field mustard	cytosol	7.58	57.75
Os07t0666900-01	Rice	vacuole	56.75	57.38
Os05t0148600-01	Rice	plasma membrane	56.19	55.88
Os11t0648000-01	Rice	plasma membrane	55.82	55.41
Os09t0286400-01	Rice	plasma membrane	26.99	27.29
Os09t0482620-00	Rice	golgi, mitochondrion, peroxisome	10.91	22.43

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	EntrezGene:9270505	UniProt:A0A0P0WVY4	ProteinID:BAS97484.1	InterPro:Cation/H_exchanger
InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006812
GO:GO:0006814	GO:GO:0006885	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651
GO:GO:0009987	GO:GO:0015297	GO:GO:0015299	GO:GO:0015385	GO:GO:0015386	GO:GO:0016020
GO:GO:0016021	GO:GO:0019725	GO:GO:0035725	GO:GO:0051453	GO:GO:0055075	GO:GO:0055085
GO:GO:0071805	GO:GO:0098719	GO:GO:1902600	InterPro:IPR038770	InterPro:NHX4	InterPro:Na+/solute_symporter_sf
InterPro:NaH_exchanger	EnsemblPlantsGene:Os06g0318500	EnsemblPlants:Os06t0318500-00	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110
PANTHER:PTHR10110:SF101	TMHMM:TMhelix	UniParc:UPI00039392C2	RefSeq:XP_015641775.1	SEG:seg	:

Description

NA+/H+ ANTIPORTER 4Similar to Sodium/hydrogen exchanger. (Os06t0318500-00)

Coordinates

chr6:+:12333229..12337317

Molecular Weight (calculated)

59616.8 Da

IEP (calculated)

7.116

GRAVY (calculated)

0.540

Length

541 amino acids

Sequence
(BLAST)

001: MAWWWWWSEA VVVGGGTGGG SSGTVVSICV FTAVLCVCLV AGHLLEENKW VNESITALLI GCVVGAIIFL LSEGKNSRIL RFDEQLFFIY VLPPIIFNAG
101: FQVKKKQFFH NFLTIMSFGI FGVFISVAIV STGCYWLFPK VGFGDLGAVD YLALGAIFSS TDTVCTLQVI SQDETPRLYS LVFGEGVVND ATSVVLFNAI
201: KNLDITQLKG GVALKVISDF LYLFFTSTML GVTIGLSTAY ALKALYFGRH STDREVALMA LMAYLSYMLA EFLDLSGILM VFFCGIVMSH YAWHNVTESS
301: RITTRHIFAT LSFIAETFIF LYVGMDALDI DKWKTSETSF KTSLGIFGII ISLVLLGRAA FVFPLSIMSN YMSGSSEKAP ITFNHQVVIW WAGLMRGAVS
401: IALAYNQFTF SGVTLDPVHA TIITSTIIVV FFTTLVFGFL TRPLISAILP HQHRQSTTPG TGGGGRSTGS NSPKDDFIMP FLSPDEEASG SGSGFLQAKR
501: SISMLLERPV HTVHIYWRKF DDRFMRPIFG GPMERDRGNC Y

Best Arabidopsis Sequence Match ( AT5G55470.1 )
(BLAST)

001: MSIGLTEFVT NKLAAEHPQV IPISVFIAIL CLCLVIGHLL EENRWVNESI TAILVGAASG TVILLISKGK SSHILVFDEE LFFIYLLPPI IFNAGFQVKK
101: KKFFHNFLTI MSFGVIGVFI STVIISFGTW WLFPKLGFKG LSARDYLAIG TIFSSTDTVC TLQILHQDET PLLYSLVFGE GVVNDATSVV LFNAVQKIQF
201: ESLTGWTALQ VFGNFLYLFS TSTLLGIGVG LITSFVLKTL YFGRHSTTRE LAIMVLMAYL SYMLAELFSL SGILTVFFCG VLMSHYASYN VTESSRITSR
301: HVFAMLSFIA ETFIFLYVGT DALDFTKWKT SSLSFGGTLG VSGVITALVL LGRAAFVFPL SVLTNFMNRH TERNESITFK HQVIIWWAGL MRGAVSIALA
401: FKQFTYSGVT LDPVNAAMVT NTTIVVLFTT LVFGFLTKPL VNYLLPQDAS HNTGNRGKRT EPGSPKEDAT LPLLSFDESA STNFNRAKDS ISLLMEQPVY
501: TIHRYWRKFD DTYMRPIFGG PRRENQPEC

Arabidopsis Description

NHX4Sodium/hydrogen exchanger 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8S397]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.