CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045883_P001	Maize	plasma membrane	93.58	91.01
TraesCS7D01G226200.1	Wheat	plasma membrane	85.28	85.77
TraesCS7A01G228400.1	Wheat	plasma membrane	85.28	85.77
HORVU7Hr1G046030.1	Barley	plasma membrane	85.09	85.58
TraesCS7B01G191300.1	Wheat	plasma membrane	84.91	85.39
Os06t0318500-00	Rice	plasma membrane	84.34	82.62
VIT_19s0090g01480.t01	Wine grape	plasma membrane	66.04	67.18
GSMUA_Achr5P04100_001	Banana	plasma membrane	65.66	66.92
KRH46278	Soybean	plasma membrane	64.15	64.27
Solyc10g006080.1.1	Tomato	plasma membrane	63.4	64.0
AT5G55470.1	Thale cress	plasma membrane	63.4	63.52
Bra002905.1-P	Field mustard	plasma membrane	61.89	61.54
CDY17324	Canola	plasma membrane	61.7	61.35
PGSC0003DMT400085382	Potato	plasma membrane	63.21	61.13
CDY45655	Canola	plasma membrane	59.43	59.55
KXG36886	Sorghum	plasma membrane	59.43	58.77
KXG21297	Sorghum	plasma membrane	58.3	56.59
EES10186	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	56.6	55.45
Bra009647.1-P	Field mustard	cytosol	7.36	54.93
KXG35307	Sorghum	plastid	27.36	27.05
KXG35876	Sorghum	plasma membrane	27.17	26.67

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	UniProt:A0A194YIU6	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885
GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0015297	GO:GO:0015299
GO:GO:0015385	GO:GO:0016020	GO:GO:0016021	GO:GO:0035725	GO:GO:0055075	GO:GO:0055085
GO:GO:1902600	InterPro:IPR038770	EnsemblPlants:KXG19894	ProteinID:KXG19894	ProteinID:KXG19894.1	InterPro:NHX4
InterPro:Na+/solute_symporter_sf	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF101
EnsemblPlantsGene:SORBI_3010G131500	TMHMM:TMhelix	UniParc:UPI0007F294EB	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:18068578..18072864

Molecular Weight (calculated)

58048.2 Da

IEP (calculated)

7.192

GRAVY (calculated)

0.632

Length

530 amino acids

Sequence
(BLAST)

001: MAAALWETLL AASAADGTGG SSTTVVSICV FTAVLCLCLV AGHLLEENKW VNESITALII GCIVGAIIFL LTEGKHSHIL RFDEQLFFIY VLPPIIFNAG
101: FQVKKKQFFH NFMTIMSFGV FGVFISGAIV SAGCYWLFPK VGFGKLDAVD YLALGAIFSS TDTVCTLQVI NQDETPRLYS LVFGEGVVND ATAVVLFNAI
201: KNLDISQLKG GVVLKLIADF LYLFATSTII GISIGLATAY VLKALYFGRH STDREVALMA LMAYLSYMLA ELLELSGILT VFFCGIVMSH YAWHNVTESS
301: RITTKHIFAT LSFIAETFIF LYVGMDALDV DKWKTSKESF KTSIGIFGIV VLLILLGRVA FVFPVSILSN ILSGSSERTP ITFKHQVVIW WAGLMRGAVS
401: IALAYNQFTF SGVTSDPVHA TIITSTIIVV FFTTLVFGFL TRPLISAMLP HQSRALSRGH STGSNSPKDD DLALPFLSSD EGASGSGIVL EQAKRSLSMM
501: LERPVHTVHV YWRKFDDRFM RPIFGGPQSY

Best Arabidopsis Sequence Match ( AT5G55470.1 )
(BLAST)

001: MSIGLTEFVT NKLAAEHPQV IPISVFIAIL CLCLVIGHLL EENRWVNESI TAILVGAASG TVILLISKGK SSHILVFDEE LFFIYLLPPI IFNAGFQVKK
101: KKFFHNFLTI MSFGVIGVFI STVIISFGTW WLFPKLGFKG LSARDYLAIG TIFSSTDTVC TLQILHQDET PLLYSLVFGE GVVNDATSVV LFNAVQKIQF
201: ESLTGWTALQ VFGNFLYLFS TSTLLGIGVG LITSFVLKTL YFGRHSTTRE LAIMVLMAYL SYMLAELFSL SGILTVFFCG VLMSHYASYN VTESSRITSR
301: HVFAMLSFIA ETFIFLYVGT DALDFTKWKT SSLSFGGTLG VSGVITALVL LGRAAFVFPL SVLTNFMNRH TERNESITFK HQVIIWWAGL MRGAVSIALA
401: FKQFTYSGVT LDPVNAAMVT NTTIVVLFTT LVFGFLTKPL VNYLLPQDAS HNTGNRGKRT EPGSPKEDAT LPLLSFDESA STNFNRAKDS ISLLMEQPVY
501: TIHRYWRKFD DTYMRPIFGG PRRENQPEC

Arabidopsis Description

NHX4Sodium/hydrogen exchanger 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8S397]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.