CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G259100.2	Wheat	plasma membrane	82.78	85.63
TraesCS5D01G268200.1	Wheat	plasma membrane	83.15	84.4
TraesCS5A01G260700.1	Wheat	plasma membrane	82.96	84.21
HORVU5Hr1G072440.26	Barley	golgi, mitochondrion, nucleus, plastid	72.22	71.82
Solyc04g056600.2.1	Tomato	plasma membrane	69.07	70.24
KRH36691	Soybean	plasma membrane	69.44	70.22
KRH11690	Soybean	plasma membrane	69.44	70.22
KXG35307	Sorghum	plastid	69.63	70.15
KRH51250	Soybean	plasma membrane	67.96	69.64
AT1G79610.1	Thale cress	plasma membrane	68.52	69.16
GSMUA_Achr10P...	Banana	peroxisome, plasma membrane, plastid	63.7	68.25
AT1G54370.1	Thale cress	plasma membrane	65.19	67.56
Bra035130.1-P	Field mustard	cytosol, golgi, plasma membrane	62.22	65.75
Os09t0482620-00	Rice	golgi, mitochondrion, peroxisome	31.67	65.02
VIT_15s0024g00260.t01	Wine grape	plasma membrane	29.07	64.88
CDX79331	Canola	plasma membrane	65.74	63.73
CDX67985	Canola	plasma membrane	65.56	63.55
Zm00001d020892_P003	Maize	plasma membrane	58.33	63.51
VIT_15s0024g00280.t01	Wine grape	golgi, plasma membrane	36.85	63.17
CDX88553	Canola	plasma membrane	65.93	61.06
CDX87370	Canola	plasma membrane	67.04	56.21
KXG19894	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	26.67	27.17
EES10186	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	26.3	26.25
KXG36886	Sorghum	plasma membrane	25.74	25.93
KXG21297	Sorghum	plasma membrane	25.74	25.46

Protein Annotations

MapMan:24.2.8.1.1	UniProt:A0A1B6QD76	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885
GO:GO:0008150	GO:GO:0015297	GO:GO:0015299	GO:GO:0015385	GO:GO:0016020	GO:GO:0016021
GO:GO:0035725	GO:GO:0055085	GO:GO:1902600	EnsemblPlants:KXG35876	ProteinID:KXG35876	ProteinID:KXG35876.1
InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF111	EnsemblPlantsGene:SORBI_3002G243400
TIGRFAMs:TIGR00840	TMHMM:TMhelix	UniParc:UPI00081ABB77	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:63242908..63249296

Molecular Weight (calculated)

59315.0 Da

IEP (calculated)

5.962

GRAVY (calculated)

0.414

Length

540 amino acids

Sequence
(BLAST)

001: MATGVSLAAA PHVASVTGSG SVEEQAAGVG ILLQISMLVL SFVLGHILRR RKFYYIPEAS GSLLIGMIVG GLANISNTQK SIRRWFNFRE DFFLLFLLPP
101: IIFQSGFSLA PKPFFSNFDA IITFAILGTF IASIVTGLLV YLGGLLYIVY RLPLVECMMF GALVSATDPV TVLSIFQELG TDTNLYALVF GESVLNDAVA
201: ISLYRTMASM RTHHSGKNFF LVILRFLENF VGSMSSGIGV GLISALLFKY AALGVENLHN LESCLFVLFP YFSYMLAEGI GLSGIVSILF TGIVMKRYTF
301: SNLSDDSQRF TARFFHLLSS LAEAFVFIYM GVDIAMERQS WSHIGFIFFS IIFILLARAA NVFPCAYILN LARPPHCQIP RQYQQALWYS GLRGAMAFAL
401: ALQSVHDLPD GHGETIFTAT TSIVVLTVLL IGGSTGTMLE ALQVVGDSNR YRQLYEENSN GDDTGYMGQN YDEGASASSK IRSKLRDLRR STSSFALLDK
501: NYLTPIFTSR NGDCDDDSTT ESPNEELTVS RGPGDLEVHD

Best Arabidopsis Sequence Match ( AT1G79610.1 )
(BLAST)

001: MSSELQISPA IHDPQGQEKQ QQAAGVGILL QIMMLVLSFV LGHVLRRHKF YYLPEASASL LIGLIVGGLA NISNTETSIR TWFNFHDEFF FLFLLPPIIF
101: QSGFSLQPKP FFSNFGAIVT FSVLGTFVAS MVTGLLVYLG GVMFLMYRLP FVECLMFGSL ISATDPVTVL SIFQELGSDV NLYALVFGES VLNDAMAISL
201: YRTMSLVRSH SSGQNFFMVI VRFLETFVGS MSAGVGVGFT SALLFKYAGL DVDNLQNLEC CLFVLFPYFS YMLAEGLSLS GIVSILFTGI VMKHYTYSNL
301: SANSQRFVSA FFHLISSLAE TFVFIYMGFD IAMEKHSWSH LGFIFFSILF IVIARAANVF GCGYLVNLAR PAHRKIPMTH QKALWYSGLR GAMAFALALQ
401: SVHDLPEGHG QTIFTATTAI VVLTVLLIGG STGTMLEALE VVGDSHDTSL GDGFEVVNSR YMTSYDDEDT PPGSGFRTKL REFHKSAASF TELDRNYLTP
501: FFTSNNGDYD DEGNMEQHHE ERIPFTRRGN LNNRG

Arabidopsis Description

NHX6Sodium/hydrogen exchanger 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.