Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G268200.1 | Wheat | plasma membrane | 99.25 | 99.25 |
| TraesCS5B01G259100.2 | Wheat | plasma membrane | 97.18 | 99.04 |
| HORVU5Hr1G072440.26 | Barley | golgi, mitochondrion, nucleus, plastid | 84.96 | 83.24 |
| KXG35876 | Sorghum | plasma membrane | 84.21 | 82.96 |
| TraesCS7A01G242300.1 | Wheat | plasma membrane | 77.44 | 76.01 |
| TraesCS5A01G176100.3 | Wheat | plasma membrane | 70.86 | 70.47 |
| KRH51250 | Soybean | plasma membrane | 68.8 | 69.45 |
| AT1G79610.1 | Thale cress | plasma membrane | 69.74 | 69.35 |
| KRH11690 | Soybean | plasma membrane | 69.55 | 69.29 |
| KRH36691 | Soybean | plasma membrane | 69.55 | 69.29 |
| GSMUA_Achr10P... | Banana | peroxisome, plasma membrane, plastid | 65.6 | 69.25 |
| Solyc04g056600.2.1 | Tomato | plasma membrane | 68.98 | 69.11 |
| AT1G54370.1 | Thale cress | plasma membrane | 65.79 | 67.18 |
| Bra035130.1-P | Field mustard | cytosol, golgi, plasma membrane | 63.91 | 66.54 |
| Os09t0482620-00 | Rice | golgi, mitochondrion, peroxisome | 31.95 | 64.64 |
| VIT_15s0024g00260.t01 | Wine grape | plasma membrane | 29.32 | 64.46 |
| VIT_15s0024g00280.t01 | Wine grape | golgi, plasma membrane | 38.16 | 64.44 |
| CDX79331 | Canola | plasma membrane | 67.11 | 64.09 |
| CDX67985 | Canola | plasma membrane | 66.92 | 63.91 |
| CDX88553 | Canola | plasma membrane | 67.48 | 61.58 |
| Zm00001d020892_P003 | Maize | plasma membrane | 53.38 | 57.26 |
| CDX87370 | Canola | plasma membrane | 68.61 | 56.68 |
| TraesCS7A01G228400.1 | Wheat | plasma membrane | 27.07 | 27.32 |
| TraesCS4A01G145300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 27.26 | 26.85 |
| TraesCS2A01G121000.1 | Wheat | plasma membrane | 26.88 | 26.58 |
| TraesCS1A01G102300.1 | Wheat | plasma membrane | 25.94 | 25.27 |
Protein Annotations
| MapMan:24.2.8.1.1 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006812 | GO:GO:0006814 | GO:GO:0006885 | GO:GO:0008150 | GO:GO:0015299 |
| GO:GO:0015385 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:NaH_exchanger | PFAM:PF00999 |
| PRINTS:PR01084 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF111 | TIGRFAMs:TIGR00840 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5A01G260700 |
| EnsemblPlants:TraesCS5A01G260700.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:474579638..474586850
Molecular Weight (calculated)
58652.0 Da
IEP (calculated)
4.922
GRAVY (calculated)
0.409
Length
532 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAGAGAYYA AAPHQGAMPG FGGAVDEQQA AGVGILLQIS MLVLSFVLGH LLRRRKFYYL PEASASLLIG MIVGGFANIS NTQKSTRRWF NFREDFFLLF
101: LLPPIIFQSG FNLAPKPFFS NFGAIITFAI LGTFIASIVT GLLVYLAGLI FIIYRLPLVE CMMFGALVSA TDPVTVLSIF QELGTDVNLY ALVFGESVLN
201: DAVAISLYRT MASMRTSSSG QNIFLVILRF LENFVGSMSS GVGVGLISAL LFKYAELGVE NLHNLESCLF VLFPYFSYML AEGLGLSGIV SILFTGIVMK
301: RYTFYNLSED SQRFTARFFH LLSSLAEAFI FIYMGFDIAM ERQSWSHIGF IFFSIVFILV ARAANVFSCA YMLNLARPPN SQIPREYQLA LWYSGLRGAM
401: AFALALQSVH DLPDGHGETI FTATTSIVVL TVLLIGGSTG TMLEALQVVG DSNRYRHPYE ENFEGSSEEG TPSKSKFQLK LRDLRRSTSS FALLDRNYLT
501: PIFTSQHEDD DDDDDNDDDS SGEVLGIPRP SA
101: LLPPIIFQSG FNLAPKPFFS NFGAIITFAI LGTFIASIVT GLLVYLAGLI FIIYRLPLVE CMMFGALVSA TDPVTVLSIF QELGTDVNLY ALVFGESVLN
201: DAVAISLYRT MASMRTSSSG QNIFLVILRF LENFVGSMSS GVGVGLISAL LFKYAELGVE NLHNLESCLF VLFPYFSYML AEGLGLSGIV SILFTGIVMK
301: RYTFYNLSED SQRFTARFFH LLSSLAEAFI FIYMGFDIAM ERQSWSHIGF IFFSIVFILV ARAANVFSCA YMLNLARPPN SQIPREYQLA LWYSGLRGAM
401: AFALALQSVH DLPDGHGETI FTATTSIVVL TVLLIGGSTG TMLEALQVVG DSNRYRHPYE ENFEGSSEEG TPSKSKFQLK LRDLRRSTSS FALLDRNYLT
501: PIFTSQHEDD DDDDDNDDDS SGEVLGIPRP SA
001: MEEVMISPVE HDPQGQVKQQ QAAGVGILLQ IMMLVLSFVL GHVLRRHRFH YLPEASGSLL IGLIVGILAN ISDTETSIRT WFNFHEEFFF LFLLPPIIFQ
101: SGFSLQPKPF FSNFGAIVTF AIIGTFVASV VTGGLVYLGG SMYLMYKLPF VECLMFGALI SATDPVTVLS IFQDVGTDVN LYALVFGESV LNDAMAISLY
201: RTMSLVNRQS SSGEHFFMVV IRFFETFAGS MSAGVGVGFT SALLFKYAGL DTENLQNLEC CLFVLFPYFS YMLAEGVGLS GIVSILFTGI VMKRYTFSNL
301: SEASQSFVSS FFHLISSLAE TFTFIYMGFD IAMEQHSWSH VGFILFSILF IGVARAVNVF GCAYLVNLFR QENQKIPMKH QKALWYSGLR GAMAFALALQ
401: SLHDLPEGHG QIIFTATTTI VVVTVLLIGG STGKMLEALE VVGDDLDDSM SEGFEESDHQ YVPPPFSIGA SSDEDTSSSG SRFKMKLKEF HKTTTSFTAL
501: DKNFLTPFFT TNSGDGDGDG E
101: SGFSLQPKPF FSNFGAIVTF AIIGTFVASV VTGGLVYLGG SMYLMYKLPF VECLMFGALI SATDPVTVLS IFQDVGTDVN LYALVFGESV LNDAMAISLY
201: RTMSLVNRQS SSGEHFFMVV IRFFETFAGS MSAGVGVGFT SALLFKYAGL DTENLQNLEC CLFVLFPYFS YMLAEGVGLS GIVSILFTGI VMKRYTFSNL
301: SEASQSFVSS FFHLISSLAE TFTFIYMGFD IAMEQHSWSH VGFILFSILF IGVARAVNVF GCAYLVNLFR QENQKIPMKH QKALWYSGLR GAMAFALALQ
401: SLHDLPEGHG QIIFTATTTI VVVTVLLIGG STGKMLEALE VVGDDLDDSM SEGFEESDHQ YVPPPFSIGA SSDEDTSSSG SRFKMKLKEF HKTTTSFTAL
501: DKNFLTPFFT TNSGDGDGDG E
Arabidopsis Description
NHX5Sodium/hydrogen exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8S396]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.